CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_003_00608
(
Aquilegia coerulea
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Aquca_003_00608
T196361_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_003_00608.1
GATA
32
67
CVDCKTTKTPLWRGGPAGPKSLCNACGIKHRKQRRA
Aquca_003_00608.2
GATA
5
40
CVDCKTTKTPLWRGGPAGPKSLCNACGIKHRKQRRA
Links
Other
GATA
family TFs
Other
Aquilegia coerulea
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GATA16
Arabidopsis lyrata
scaffold_801309.1
I
0.808
GATA17
Arabidopsis lyrata
fgenesh2_kg.3__1856__AT3G16870.1
I
0.822
fgenesh1_pm.C_scaffold_7002128
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7002128
I
0.822
AT4G16141
Arabidopsis thaliana
AT4G16141
I
0.822
GATA17
Arabidopsis thaliana
AT3G16870
I
0.822
Bostr.28625s0006
Boechera stricta
Bostr.28625s0006
I
0.822
Bostr.30275s0055
Boechera stricta
Bostr.30275s0055
I
0.822
Bostr.15774s0060
Boechera stricta
Bostr.15774s0060
I
0.808
Bo7g104200
Brassica oleracea
Bo7g104200
I
0.822
Bo1g055120
Brassica oleracea
Bo1g055120
I
0.822
Bo5g123610
Brassica oleracea
Bo5g123610
I
0.821
Bo00847s050
Brassica oleracea
Bo00847s050
I
0.808
Bo1g122970
Brassica oleracea
Bo1g122970
I
0.822
Bo3g068560
Brassica oleracea
Bo3g068560
I
0.822
Bra033533
Brassica rapa
Bra033533
I
0.822
Bra022184
Brassica rapa
Bra022184
I
0.822
Bra012742
Brassica rapa
Bra012742
I
0.822
Bra020650
Brassica rapa
Bra020650
I
0.808
Bra021209
Brassica rapa
Bra021209
I
0.822
PK18820.1
Cannabis sativa
PK18820.1
I
0.812
Cagra.5497s0020
Capsella grandiflora
Cagra.5497s0020
I
0.822
Cagra.0053s0014
Capsella grandiflora
Cagra.0053s0014
I
0.822
Carubv10027332m.g
Capsella rubella
Carubv10027332m.g
I
0.808
Carubv10014665m.g
Capsella rubella
Carubv10014665m.g
I
0.822
Carubv10005860m.g
Capsella rubella
Carubv10005860m.g
I
0.822
evm.TU.supercontig_151.51
Carica papaya
evm.TU.supercontig_151.51
I
0.812
evm.TU.supercontig_48.133
Carica papaya
evm.TU.supercontig_48.133
I
0.812
evm.TU.supercontig_9.102
Carica papaya
evm.TU.supercontig_9.102
I
0.808
Ca_02992
Cicer arietinum
Ca_02992
I
0.806
Cla009422
Citrullus lanatus
Cla009422
I
0.812
Cla022104
Citrullus lanatus
Cla022104
I
0.808
Ciclev10006161m.g
Citrus clementina
Ciclev10006161m.g
I
0.812
Ciclev10003698m.g
Citrus clementina
Ciclev10003698m.g
I
0.811
Ciclev10022856m.g
Citrus clementina
Ciclev10022856m.g
I
0.811
orange1.1g030971m.g
Citrus sinensis
orange1.1g030971m.g
I
0.811
orange1.1g032112m.g
Citrus sinensis
orange1.1g032112m.g
I
0.812
orange1.1g033001m.g
Citrus sinensis
orange1.1g033001m.g
I
0.811
Cucsa.252730
Cucumis sativus
Cucsa.252730
I
0.808
Cucsa.069460
Cucumis sativus
Cucsa.069460
I
0.812
Eucgr.A00193
Eucalyptus grandis
Eucgr.A00193
I
0.808
Eucgr.H04023
Eucalyptus grandis
Eucgr.H04023
I
0.812
Thhalv10026300m.g
Eutrema salsugineum
Thhalv10026300m.g
I
0.822
Thhalv10021612m.g
Eutrema salsugineum
Thhalv10021612m.g
I
0.822
Thhalv10005103m.g
Eutrema salsugineum
Thhalv10005103m.g
I
0.808
gene05175-v1.0-hybrid
Fragaria vesca
gene05175-v1.0-hybrid
I
0.808
GLYMA07G37190
Glycine max
GLYMA07G37190
I
0.811
GLYMA17G03410
Glycine max
GLYMA17G03410
I
0.811
Gorai.005G065300
Gossypium raimondii
Gorai.005G065300
I
0.808
Gorai.007G125000
Gossypium raimondii
Gorai.007G125000
I
0.811
Gorai.013G206400
Gossypium raimondii
Gorai.013G206400
N
0.816
Gorai.013G127900
Gossypium raimondii
Gorai.013G127900
I
0.812
Gorai.008G142200
Gossypium raimondii
Gorai.008G142200
I
0.811
Lus10020684.g
Linum usitatissimum
Lus10020684.g
N
0.807
Lus10016849.g
Linum usitatissimum
Lus10016849.g
I
0.808
Lus10029863.g
Linum usitatissimum
Lus10029863.g
N
0.807
Lus10037721.g
Linum usitatissimum
Lus10037721.g
I
0.808
LjSGA_011217.1
Lotus japonicus
LjSGA_011217.1
I
0.806
cassava37139.valid.m1
Manihot esculenta
cassava37139.valid.m1
I
0.811
cassava15588.m1
Manihot esculenta
cassava15588.m1
I
0.812
cassava43030.valid.m1
Manihot esculenta
cassava43030.valid.m1
I
0.808
cassava15577.m1
Manihot esculenta
cassava15577.m1
I
0.812
MTR_4g121110
Medicago truncatula
MTR_4g121110
I
0.806
mgf003937m
Mimulus guttatus
mgf003937m
I
0.808
mgf011737m
Mimulus guttatus
mgf011737m
N
0.815
mgf022078m
Mimulus guttatus
mgf022078m
I
0.816
POPTR_0008s22950
Populus trichocarpa
POPTR_0008s22950
I
0.806
POPTR_0005s02040
Populus trichocarpa
POPTR_0005s02040
I
0.812
POPTR_0010s00360
Populus trichocarpa
POPTR_0010s00360
I
0.806
Pm008287
Prunus mume
Pm008287
I
0.808
Pm003128
Prunus mume
Pm003128
I
0.825
PRUPE_ppa015310mg
Prunus persica
PRUPE_ppa015310mg
I
0.825
PRUPE_ppa013171mg
Prunus persica
PRUPE_ppa013171mg
I
0.808
29889.m003248
Ricinus communis
29889.m003248
I
0.811
SapurV1A.0107s0060
Salix purpurea
SapurV1A.0107s0060
I
0.812
SapurV1A.0186s0560
Salix purpurea
SapurV1A.0186s0560
I
0.812
SapurV1A.0739s0060
Salix purpurea
SapurV1A.0739s0060
I
0.806
SapurV1A.2413s0010
Salix purpurea
SapurV1A.2413s0010
I
0.806
Solyc12g099370.1
Solanum lycopersicum
Solyc12g099370.1
I
0.812
Solyc05g054400.2
Solanum lycopersicum
Solyc05g054400.2
I
0.827
PGSC0003DMG400004624
Solanum tuberosum
PGSC0003DMG400004624
I
0.812
PGSC0003DMG400023434
Solanum tuberosum
PGSC0003DMG400023434
I
0.827
TCM_026732
Theobroma cacao
TCM_026732
I
0.812
TCM_021303
Theobroma cacao
TCM_021303
I
0.808
TCM_004753
Theobroma cacao
TCM_004753
I
0.825
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.812
VIT_05s0077g01450
Vitis vinifera
VIT_05s0077g01450
I
0.812