Ciclev10006161m.g (Citrus clementina)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Ciclev10006161m.g T196481_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.889
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.818 0.889
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.818 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006161m GATA 36 71

Links

Other GATA family TFs
Other Citrus clementina TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I 0.000
AAEL010925 Aedes aegypti AAEL010925 I 0.000
ANCDUO_13359 Ancylostoma duodenale ANCDUO_13359 I 0.000
ANCDUO_18278 Ancylostoma duodenale ANCDUO_18278 I 0.000
AALB009947 Anopheles albimanus AALB009947 I 0.000
AARA006326 Anopheles arabiensis AARA006326 I 0.000
AATE005744 Anopheles atroparvus AATE005744 I 0.000
ACHR006794 Anopheles christyi ACHR006794 I 0.000
ACOM041695 Anopheles coluzzii ACOM041695 I 0.000
ACUA001543 Anopheles culicifacies ACUA001543 I 0.000
AEPI007009 Anopheles epiroticus AEPI007009 I 0.000
AFAF006302 Anopheles farauti AFAF006302 I 0.000
AFUN006149 Anopheles funestus AFUN006149 I 0.000
AGAP010511 Anopheles gambiae AGAP010511 I 0.000
AMAM005702 Anopheles maculatus AMAM005702 I 0.000
AMEC009624 Anopheles melas AMEC009624 I 0.000
AMIN001256 Anopheles minimus AMIN001256 I 0.000
AQUA001309 Anopheles quadriannulatus AQUA001309 I 0.000
ASTEI07121 Anopheles stephensi ASTEI07121 I 0.000
GB47234 Apis mellifera GB47234 I 0.000
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I 0.000
ACEP12187 Atta cephalotes ACEP12187 I 0.000
BGLB003854 Biomphalaria glabrata BGLB003854 I 0.000
BGIBMGA001382 Bombyx mori BGIBMGA001382 I 0.000
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.000
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.000
CJA08385 Caenorhabditis japonica CJA08385 I 0.000
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.000
CapteG221100 Capitella teleta CapteG221100 I 0.000
SRF Choloepus hoffmanni ENSCHOG00000008671 I 0.000
CLEC013393 Cimex lectularius CLEC013393 I 0.000
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I 0.000
CGI_10019446 Crassostrea gigas CGI_10019446 I 0.000
CpipJ_CPIJ016459 Culex pipiens CpipJ_CPIJ016459 I 0.000
CpipJ_CPIJ008336 Culex pipiens CpipJ_CPIJ008336 I 0.000
CPIJ008336 Culex quinquefasciatus CPIJ008336 I 0.000
CPIJ016459 Culex quinquefasciatus CPIJ016459 I 0.000
KGM_22252 Danaus plexippus KGM_22252 I 0.000
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.000
GF11392 Drosophila ananassae FBgn0088432 I 0.000
GG22961 Drosophila erecta FBgn0115118 I 0.000
GH20989 Drosophila grimshawi FBgn0128451 I 0.000
bs Drosophila melanogaster FBgn0004101 D 0.000
GI21322 Drosophila mojavensis FBgn0144052 I 0.000
GL20046 Drosophila persimilis FBgn0157643 I 0.000
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.000
GM11854 Drosophila sechellia FBgn0166795 I 0.000
GD11852 Drosophila simulans FBgn0183591 I 0.000
GJ21595 Drosophila virilis FBgn0208714 I 0.000
GK22205 Drosophila willistoni FBgn0224190 I 0.000
GE14398 Drosophila yakuba FBgn0232006 I 0.000
HHAL001484-PA Halyomorpha halys HHAL001484-PA I 0.000
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.000
HMEL017831 Heliconius melpomene HMEL017831 I 0.000
HelroG137972 Helobdella robusta HelroG137972 I 0.000
ISCW019966 Ixodes scapularis ISCW019966 I 0.000
LDEC007646 Leptinotarsa decemlineata LDEC007646 I 0.000
LotgiG59850 Lottia gigantea LotgiG59850 I 0.000
LCUP011662 Lucilia cuprina LCUP011662 I 0.000
MESCA004860 Megaselia scalaris MESCA004860 I 0.000
MDOA002443 Musca domestica MDOA002443 I 0.000
NV18787 Nasonia vitripennis NV18787 I 0.000
OFLC_0001346401 Onchocerca flexuosa OFLC_0001346401 I 0.000
SRF Oryzias latipes ENSORLG00000013036 I 0.000
PPAI006358 Phlebotomus papatasi PPAI006358 I 0.000
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.000
RPRC001752 Rhodnius prolixus RPRC001752 I 0.000
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.000
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.000
SINV23963 Solenopsis invicta SINV23963 I 0.000
L596_g5274 Steinernema carpocapsae L596_g5274 I 0.000
L889_g24087 Steinernema feltiae L889_g24087 I 0.000
L893_g14743 Steinernema glaseri L893_g14743 I 0.000
L898_g9834 Steinernema monticolum L898_g9834 I 0.000
L892_g14520 Steinernema scapterisci L892_g14520 I 0.000
SMAR003014 Strigamia maritima SMAR003014 I 0.000
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I 0.000
TC004911 Tribolium castaneum TC004911 I 0.000
D917_02561 Trichinella nativa D917_02561 I 0.000
EFV60876 Trichinella spiralis EFV60876 I 0.000
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.000
D918_07967 Trichuris suis D918_07967 I 0.000
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.000
ENSXMAG00000018559 Xiphophorus maculatus ENSXMAG00000018559 I 0.000
L798_08800 Zootermopsis nevadensis L798_08800 I 0.000