SMTD_0000548601 (Schistosoma mattheei)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 SMTD_0000548601 T198260_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.664 0.664
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.664 0.664
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.664 0.664
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.664 0.664
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0000548601-mRNA-1 GCM 248 385

Links

Other GCM family TFs
Other Schistosoma mattheei TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_01305 Arthroderma benhamiae ARB_01305 I
MCYG_05808 Arthroderma otae MCYG_05808 I
e_gw1.00129.103.1 Aspergillus carbonarius e_gw1.00129.103.1 I
ACLA_030720 Aspergillus clavatus CADACLAG00002636 I
CADAFLAG00002231 Aspergillus flavus CADAFLAG00002231 I
AFUA_1G03860 Aspergillus fumigatus CADAFUAG00008577 I
amdR Aspergillus nidulans CADANIAG00004647 D
CADAORAG00001528 Aspergillus oryzae CADAORAG00001528 I
EURHEDRAFT_457629 Aspergillus ruber EURHEDRAFT_457629 I
ATEG_03826 Aspergillus terreus CADATEAG00009146 I
BDDG_02000 Blastomyces dermatitidis BDDG_02000 I
CIMG_04625 Coccidioides immitis CIMG_04625 I
CPC735_071800 Coccidioides posadasii CPC735_071800 I
HCBG_00538 Histoplasma capsulatum HCBG_00538 I
MCYG_05808 Microsporum canis MCYG_05808 I
NFIA_020820 Neosartorya fischeri CADNFIAG00001564 I
PABG_06313 Paracoccidioides brasiliensis PABG_06313 I
PAAG_05745 Paracoccidioides sp lutzii PAAG_05745 I
Pc16g08250 Penicillium chrysogenum Pc16g08250 I
PDIP_21350 Penicillium digitatum PDIP_21350 I
PEX1_002190 Penicillium expansum PEX1_002190 I
PITC_030840 Penicillium italicum PITC_030840 I
PMAA_055050 Penicillium marneffei PMAA_055050 I
PDE_02833 Penicillium oxalicum PDE_02833 I
PCH_Pc16g08250 Penicillium rubens PCH_Pc16g08250 I
U727_00433100421 Penicillium solitum U727_00433100421 I
PFICI_10661 Pestalotiopsis fici PFICI_10661 N
PMAA_055050 Talaromyces marneffei PMAA_055050 I
TSTA_017820 Talaromyces stipitatus TSTA_017820 I
H102_03399 Trichophyton rubrum H102_03399 I
H105_03420 Trichophyton soudanense H105_03420 I
H105_03416 Trichophyton soudanense H105_03416 I
TESG_08028 Trichophyton tonsurans TESG_08028 I
UREG_01825 Uncinocarpus reesii UREG_01825 I