tfcp2 (Danio rerio)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSDARG00000060306 T198954_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.924 0.924
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.810 0.810
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.810 0.810
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.810 0.810
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.796 0.796
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.796 0.796
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.796 0.796
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.796 0.796
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.791 0.791
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.791 0.791
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.791 0.791
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000121618 Grainyhead 45 260

Links

Other Grainyhead family TFs
Other Danio rerio TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.915
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.803
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.801
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.818
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.822
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.848
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.780
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.848
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.828
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.842
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.924
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.796
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.701
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.835
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.777
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.865
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.981
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.808
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.844
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.910
UBP1 Bos taurus ENSBTAG00000003968 I 0.796
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.801
TFCP2 Bos taurus ENSBTAG00000019312 I 0.910
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.835
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.777
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.791
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.796
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.915
Aan_R001501 Calypte anna Aan_R001501 I 0.777
Aan_R003641 Calypte anna Aan_R003641 I 0.835
Aan_R009566 Calypte anna Aan_R009566 I 0.932
UBP1 Canis familiaris ENSCAFG00000004598 I 0.803
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.806
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.915
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.843
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.803
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.791
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.928
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.825
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.915
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.791
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.818
ubp1 Danio rerio ENSDARG00000018000 I 0.794
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.869
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.812
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.845
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.834
TFCP2 Echinops telfairi ENSETEG00000010787 I 0.914
UBP1 Echinops telfairi ENSETEG00000016510 I 0.837
UBP1 Equus caballus ENSECAG00000018555 I 0.847
TFCP2 Equus caballus ENSECAG00000020650 I 0.915
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.796
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.743
UBP1 Felis catus ENSFCAG00000006123 I 0.847
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.814
TFCP2 Felis catus ENSFCAG00000030292 I 0.915
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.777
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.782
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.837
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.934
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.754
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.929
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.825
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.785
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.754
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.943
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.820
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.777
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.910
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.818
TFCP2L1 Homo sapiens ENSG00000115112 D 0.818
TFCP2 Homo sapiens ENSG00000135457 D 0.915
UBP1 Homo sapiens ENSG00000153560 D 0.808
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.869
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.768
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.807
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.837
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.923
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.767
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.763
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.773
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.948
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.813
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.910
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.841
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.869
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.791
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.915
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.763
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.791
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.837
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.815
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I 0.849
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.796
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.825
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.834
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.752
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.912
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.763
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.803
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.905
Ubp1 Mus musculus ENSMUSG00000009741 I 0.785
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.807
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.910
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.820
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.839
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.723
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.791
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.910
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.796
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.791
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.915
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.905
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.803
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.785
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.901
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.754
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.712
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.962
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.804
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.799
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.817
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.806
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.791
ubp1 Oryzias latipes ENSORLG00000011706 I 0.829
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.938
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.798
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.915
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.818
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.806
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.842
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.910
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.915
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.801
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.791
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.773
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.818
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.915
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.827
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.841
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.870
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.825
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.789
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.857
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.829
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.939
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.820
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.924
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.854
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.915
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.818
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.791
UBP1 Procavia capensis ENSPCAG00000008237 I 0.832
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.785
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.791
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.857
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.812
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.782
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.919
ENSSHAG00000000283 Sarcophilus harrisii ENSSHAG00000000283 I 0.707
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.910
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.835
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.782
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.782
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.825
UBP1 Sorex araneus ENSSARG00000008670 I 0.829
UBP1 Sus scrofa ENSSSCG00000011235 I 0.834
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.818
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.840
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.913
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.819
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.888
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.791
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.877
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.810
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I 0.711
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.905
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.841
Tal_R010177 Tyto alba Tal_R010177 I 0.932
Tal_R011103 Tyto alba Tal_R011103 I 0.835
Tal_R012945 Tyto alba Tal_R012945 I 0.777
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.918
AAI06326 Xenopus laevis AAI06326 I 0.834
AAP78771 Xenopus laevis AAP78771 I 0.838
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.841
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.838
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.820
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.852
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.844
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.943