Tfcp2 (Rattus norvegicus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSRNOG00000032395 T199218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.976 0.976
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.843 0.843
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.843 0.843
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.843 0.843
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.805 0.805
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.805 0.805
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.805 0.805
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.795 0.795
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.795 0.795
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.795 0.795
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.795 0.795
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.742 0.742
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.742 0.742
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.742 0.742
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.742 0.742
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.742 0.742
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.742 0.742
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.742 0.742
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.742 0.742
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.742 0.742
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000037251 Grainyhead 44 260
ENSRNOP00000068740 Grainyhead 44 260

Links

Other Grainyhead family TFs
Other Rattus norvegicus TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.981
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.798
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.824
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.823
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.824
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.895
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.786
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.895
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.838
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.833
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.962
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.786
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.705
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.840
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.786
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.895
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.914
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.819
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.838
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.976
UBP1 Bos taurus ENSBTAG00000003968 I 0.786
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.824
TFCP2 Bos taurus ENSBTAG00000019312 I 0.976
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.840
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.786
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.790
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.829
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.981
Aan_R001501 Calypte anna Aan_R001501 I 0.786
Aan_R003641 Calypte anna Aan_R003641 I 0.840
Aan_R009566 Calypte anna Aan_R009566 I 0.962
UBP1 Canis familiaris ENSCAFG00000004598 I 0.798
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.829
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.981
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.890
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.790
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.819
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.957
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.829
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.981
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.790
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.843
ubp1 Danio rerio ENSDARG00000018000 I 0.771
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.705
tfcp2 Danio rerio ENSDARG00000060306 I 0.919
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.913
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.814
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.843
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.833
UBP1 Echinops telfairi ENSETEG00000016510 I 0.827
UBP1 Equus caballus ENSECAG00000018555 I 0.843
TFCP2 Equus caballus ENSECAG00000020650 I 0.981
ENSECAG00000023454 Equus caballus ENSECAG00000023454 I 0.717
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.819
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.752
UBP1 Felis catus ENSFCAG00000006123 I 0.843
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.829
TFCP2 Felis catus ENSFCAG00000030292 I 0.981
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.810
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.790
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.838
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.895
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.743
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.976
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.843
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.789
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.743
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.919
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.829
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.786
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.943
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.843
TFCP2L1 Homo sapiens ENSG00000115112 D 0.843
TFCP2 Homo sapiens ENSG00000135457 D 0.981
UBP1 Homo sapiens ENSG00000153560 D 0.795
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.900
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.767
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.819
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.817
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.743
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.752
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.786
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.781
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.925
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.829
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.981
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.833
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.900
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.790
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.981
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.786
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.790
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.847
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.833
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.829
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.848
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.829
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.772
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.771
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.798
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.981
Ubp1 Mus musculus ENSMUSG00000009741 I 0.794
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.805
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.971
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.814
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.843
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.733
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.790
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.976
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.829
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.790
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.981
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.971
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.786
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.780
Ogr16171 Ophisaurus gracilis Ogr16171 I 0.700
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.943
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.752
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.717
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.905
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.833
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.781
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.838
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.829
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.790
ubp1 Oryzias latipes ENSORLG00000011706 I 0.814
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.914
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.786
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.981
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.843
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.829
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.829
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.971
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.981
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.833
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.790
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.786
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.843
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.981
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.832
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.836
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.904
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.843
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.767
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.857
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.810
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.892
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.819
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.971
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.849
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.981
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.843
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.790
UBP1 Procavia capensis ENSPCAG00000008237 I 0.846
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.843
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.790
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.900
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.824
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.795
ENSSHAG00000000283 Sarcophilus harrisii ENSSHAG00000000283 I 0.752
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.976
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.810
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.824
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.743
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.848
UBP1 Sorex araneus ENSSARG00000008670 I 0.833
UBP1 Sus scrofa ENSSSCG00000011235 I 0.843
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.829
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.829
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.957
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.814
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.929
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.824
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.843
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.824
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.962
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.833
Tal_R010177 Tyto alba Tal_R010177 I 0.962
Tal_R011103 Tyto alba Tal_R011103 I 0.840
Tal_R012945 Tyto alba Tal_R012945 I 0.786
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.962
AAI06326 Xenopus laevis AAI06326 I 0.867
AAP78771 Xenopus laevis AAP78771 I 0.867
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.826
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.876
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.814
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.886
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.819
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.900