TFCP2L1 (Sus scrofa)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSSSCG00000015732 T199240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.986 0.986
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.986 0.986
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.986 0.986
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.957 0.957
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.957 0.957
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.957 0.957
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.842 0.842
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.761 0.761
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.761 0.761
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.761 0.761
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000016672 Grainyhead 25 240
ENSSSCP00000028308 Grainyhead 25 240
ENSSSCP00000029871 Grainyhead 25 240
ENSSSCP00000030922 Grainyhead 25 240

Links

Other Grainyhead family TFs
Other Sus scrofa TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.837
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.760
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.976
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.764
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.938
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.785
Alligator_sinensis_CCG020804.1 Alligator sinensis Alligator_sinensis_CCG020804.1 N 0.713
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.756
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.782
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.952
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.943
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.834
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.732
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.703
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.951
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.742
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.797
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.818
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.971
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.794
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.825
UBP1 Bos taurus ENSBTAG00000003968 I 0.751
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.976
TFCP2 Bos taurus ENSBTAG00000019312 I 0.825
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.951
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.742
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.756
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.971
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.837
Aan_R001501 Calypte anna Aan_R001501 I 0.742
Aan_R003641 Calypte anna Aan_R003641 I 0.951
Aan_R009566 Calypte anna Aan_R009566 I 0.841
UBP1 Canis familiaris ENSCAFG00000004598 I 0.760
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.981
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.837
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.771
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.760
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.962
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.836
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.938
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.837
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.756
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.986
ubp1 Danio rerio ENSDARG00000018000 I 0.775
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.703
tfcp2 Danio rerio ENSDARG00000060306 I 0.818
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.791
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.770
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.807
Tfcp2l1 Dipodomys ordii ENSDORG00000004265 I 0.805
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.789
TFCP2 Echinops telfairi ENSETEG00000010787 I 0.714
UBP1 Echinops telfairi ENSETEG00000016510 I 0.798
UBP1 Equus caballus ENSECAG00000018555 I 0.799
TFCP2 Equus caballus ENSECAG00000020650 I 0.837
ENSECAG00000023454 Equus caballus ENSECAG00000023454 I 0.701
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.962
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.854
UBP1 Felis catus ENSFCAG00000006123 I 0.799
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.976
TFCP2 Felis catus ENSFCAG00000030292 I 0.837
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.727
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.746
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.952
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.789
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.708
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.838
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.957
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.742
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.713
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.818
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.943
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.742
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.829
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.986
TFCP2L1 Homo sapiens ENSG00000115112 D 0.986
TFCP2 Homo sapiens ENSG00000135457 D 0.839
UBP1 Homo sapiens ENSG00000153560 D 0.764
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.796
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.737
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.966
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.779
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.811
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.833
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.766
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.766
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.808
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.981
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.825
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.803
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.796
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.737
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.756
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.837
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.933
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.756
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.794
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.947
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I 0.717
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.971
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.981
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.776
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.723
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.875
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.890
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.760
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.833
Ubp1 Mus musculus ENSMUSG00000009741 I 0.761
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.966
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.828
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.952
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.799
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.859
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.756
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.825
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.971
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.756
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.837
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.820
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.755
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.746
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.812
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.722
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.722
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.801
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.967
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.742
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.981
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.728
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.756
ubp1 Oryzias latipes ENSORLG00000011706 I 0.789
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.809
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.755
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.837
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.986
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.981
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.785
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.828
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.837
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.976
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.756
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.751
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.986
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.837
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.780
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.947
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.793
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.809
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.737
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.864
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.785
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.793
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.933
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.839
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.827
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.837
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.986
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.756
UBP1 Procavia capensis ENSPCAG00000008237 I 0.803
TFCP2L1 Pteropus vampyrus ENSPVAG00000001653 I 0.784
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.756
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.781
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.976
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.761
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.829
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.833
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.772
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.738
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.981
UBP1 Sorex araneus ENSSARG00000008670 I 0.789
UBP1 Sus scrofa ENSSSCG00000011235 I 0.799
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.947
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.845
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.786
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.770
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.967
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.763
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.799
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I 0.842
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.825
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.793
Tal_R010177 Tyto alba Tal_R010177 I 0.841
Tal_R011103 Tyto alba Tal_R011103 I 0.951
Tal_R012945 Tyto alba Tal_R012945 I 0.742
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.823
AAI06326 Xenopus laevis AAI06326 I 0.777
AAP78771 Xenopus laevis AAP78771 I 0.781
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.913
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.786
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.900
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.795
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.794
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.804