CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA09G01440
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA09G01440
T200174_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA09G01440.1
GRAS
175
546
LKEVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIHIIDFQVAQGTQWLLLIQALASRPGGAPFIRVTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSELELENLVIQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERHELLGKWRSRFSMAGFAPCPLSSSVTAAVRNMLNEFNENYRLQHRDGALYLGWKSRAMCTSSAWR
GLYMA09G01440.2
GRAS
175
546
LKEVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIHIIDFQVAQGTQWLLLIQALASRPGGAPFIRVTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSELELENLVIQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERHELLGKWRSRFSMAGFAPCPLSSSVTAAVRNMLNEFNENYRLQHRDGALYLGWKSRAMCTSSAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK04573.1
Cannabis sativa
PK04573.1
N
0.721
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.747
Ca_20223
Cicer arietinum
Ca_20223
N
0.789
Ca_07887
Cicer arietinum
Ca_07887
N
0.818
Cla014623
Citrullus lanatus
Cla014623
N
0.751
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.759
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.756
Cucsa.044690
Cucumis sativus
Cucsa.044690
N
0.740
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.756
GLYMA07G39650
Glycine max
GLYMA07G39650
N
0.799
GLYMA17G01150
Glycine max
GLYMA17G01150
N
0.797
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.965
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.759
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.745
Lus10000539.g
Linum usitatissimum
Lus10000539.g
N
0.734
Lus10017554.g
Linum usitatissimum
Lus10017554.g
N
0.729
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.805
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.862
MDP0000254936
Malus domestica
MDP0000254936
N
0.732
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.702
MTR_4g133660
Medicago truncatula
MTR_4g133660
N
0.783
MTR_2g026250
Medicago truncatula
MTR_2g026250
N
0.737
POPTR_0016s01110
Populus trichocarpa
POPTR_0016s01110
N
0.737
POPTR_0006s01720
Populus trichocarpa
POPTR_0006s01720
N
0.710
Pm012494
Prunus mume
Pm012494
N
0.751
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.756
27529.m000047
Ricinus communis
27529.m000047
N
0.715
SapurV1A.0359s0250
Salix purpurea
SapurV1A.0359s0250
N
0.721
SapurV1A.0823s0110
Salix purpurea
SapurV1A.0823s0110
N
0.737
TCM_030393
Theobroma cacao
TCM_030393
N
0.753
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.745