CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g020840
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_8g020840
T200572_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET01770
GRAS
168
548
AEQLLNPCAVAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTPSGTITFASTEPRFFQKSLLKFYEFSPWFSFPNNIANASILQVLAEEPNNLRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVNASSSTENDQNMETPFSIGPCGDTFSSGLLGYAQSLNVNLQIKKLDNHPLQTLNAKSVDTSSDETLIVCAQFRLHHLNHNNPDERSEFLKVLRGMEPKGVILSENNMECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKNRDSDERKMMEGEAAKALTNQREMNERREKWCERMKEAGFAGEVFGEDAIDGGRALLRKYDNNWEMKVEENSTSVELWWKSQPVSFCSLWK
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK20670.1
Cannabis sativa
PK20670.1
N
0.716
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.704
Ca_10004
Cicer arietinum
Ca_10004
N
0.898
Ciclev10027413m.g
Citrus clementina
Ciclev10027413m.g
N
0.700
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.733
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.737
GLYMA16G01020
Glycine max
GLYMA16G01020
N
0.831
GLYMA07G04430
Glycine max
GLYMA07G04430
N
0.814
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.751
Lus10000532.g
Linum usitatissimum
Lus10000532.g
N
0.729
Lus10022097.g
Linum usitatissimum
Lus10022097.g
N
0.724
chr5.CM0569.130.nd
Lotus japonicus
chr5.CM0569.130.nd
N
0.781
MDP0000308434
Malus domestica
MDP0000308434
N
0.737
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.737
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.729
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.740
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.763
Pm013263
Prunus mume
Pm013263
N
0.758
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.763
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.748
TCM_029136
Theobroma cacao
TCM_029136
N
0.747
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.742