CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA12G0145700
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA12G0145700
T200988_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA12G0145700.1
GRAS
358
730
LRTLLIHCAQAVATDDRRSATELLKQIKQHAKPTGDATQRLAHCFAEGLQARIAGTGSLVHQSLVAKRTSAVDILQAYQLYMAAICFKKVSFIFSNQTIYNASLGKKKIHIVDYGIQYGFQWPCFLRRISQREGGPPEVRMTGIDLPQPGFRPTERIEETGHRLSKYAQEFGVPFKYNAIAAVKMESVRKEDLNIDPDEVLIVNCQYQFKNLMDESVVIDSPRDIVLSNIRKMQPHVFIHAIVNGSFSAPFFVTRFREALFFYSALFDVLDATTPRESEQRLLIEQNIFGRAALNVIACEGIDRVERPETYKQWQVRNQRAGFKQLPLNPEIVQVVRNKVKDCYHKDFVIDIDHQWLLQGWKGRILYAISTWT
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_32974
Aegilops tauschii
F775_32974
N
0.852
BRADI2G52227
Brachypodium distachyon
BRADI2G52227
N
0.704
BRADI4G03867
Brachypodium distachyon
BRADI4G03867
N
0.865
MLOC_21297
Hordeum vulgare
MLOC_21297
N
0.846
LPERR12G13750
Leersia perrieri
LPERR12G13750
N
0.763
OBART11G23670
Oryza barthii
OBART11G23670
N
0.706
OBART12G16530
Oryza barthii
OBART12G16530
N
1.000
OB12G23410
Oryza brachyantha
OB12G23410
N
0.938
ORGLA12G0207400
Oryza glaberrima
ORGLA12G0207400
N
1.000
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
0.704
OGLUM12G18120
Oryza glumaepatula
OGLUM12G18120
N
0.997
BGIOSGA037646
Oryza indica
BGIOSGA037646
N
1.000
OMERI12G11530
Oryza meridionalis
OMERI12G11530
N
0.995
ONIVA12G14900
Oryza nivara
ONIVA12G14900
N
1.000
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
0.706
OPUNC12G15050
Oryza punctata
OPUNC12G15050
N
0.976
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
0.706
ORUFI12G18360
Oryza rufipogon
ORUFI12G18360
N
0.997
OS12G0573200
Oryza sativa
OS12G0573200
N
1.000
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
0.704
Pavir.J08330
Panicum virgatum
Pavir.J08330
N
0.728
Pavir.J28748
Panicum virgatum
Pavir.J28748
N
0.857
Pavir.J38998
Panicum virgatum
Pavir.J38998
N
0.763
Sb08g018940
Sorghum bicolor
Sb08g018940
N
0.871
Traes_5BS_ED54C58C5
Triticum aestivum
Traes_5BS_ED54C58C5
N
0.846
Traes_5DS_C06FE6037
Triticum aestivum
Traes_5DS_C06FE6037
N
0.852
TRIUR3_22881
Triticum urartu
TRIUR3_22881
N
0.722
GRMZM2G179325
Zea mays
GRMZM2G179325
N
0.863
GRMZM2G159475
Zea mays
GRMZM2G159475
N
0.871