CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_13s0019g01710
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_13s0019g01710
T201840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_13s0019g01710.t01
GRAS
354
725
LSNLLTLCAQAVVAGNQRSANDQLKLIRQHASPMGDGMQRMAYYFVNGLEARLRGSGTEIYKGVLTRGTSAANILKAYHLFLAICPFKKLLNFFSNTTIRKLAEKAESLHIIDFGILYGFQWPSLIQCLSSRPGGPPKLRITGIDLPKPGFRPAERVQETGRRLANYAKSFNVPFEFNAIAQKWETIQVEDLKIDTEDVLVVNCHCRFRNLLDETVTVESPRDTVLNLIRKLNPVVFIQGIVNGGYGAPFFRTRFREALFHYSALFDMLEHIVPRERLERTVIEREFFGWEAMNVIACEGSERIERPESYRQCQFRNMRAGFMQLPLDEEIVNKAKEKLKLCYHKDFILYEDGPWLLQGWKGRMLFAISSWK
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.703
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.724
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.722
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.735
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.738
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.703
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.705
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.700
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.719
XM_002316242.1
Populus trichocarpa
POPTR_0010s20980
N
0.706
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.705
27568.m000253
Ricinus communis
27568.m000253
N
0.719
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.705
TCM_042705
Theobroma cacao
TCM_042705
N
0.753
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.792
VIT_13s0019g01790
Vitis vinifera
VIT_13s0019g01790
N
0.713
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.759