CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm024459
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm024459
T201984_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm024459
GRAS
20
391
LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLANRLALVQPLGAVGFIGSPVNAKDFALDKKEEALRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGMTLGLPHGDQWRGLIESLATRAGQPPSRLRITGVGLYGDRLQIIGDELEAYADRLGINLEFSVVESNLENLRPEDIKLLDGEVLVVNSILQLHCVVKESRGALNSVLQMVHELSPKILVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAAPIKMLVNAKQWLGKIKVCEGYTILEEKGCLVLGWKSKPIVAASCWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK09859.1
Cannabis sativa
PK09859.1
N
0.772
Ca_08777
Cicer arietinum
Ca_08777
N
0.786
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.849
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.849
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.882
GLYMA05G03020
Glycine max
GLYMA05G03020
N
0.766
Gorai.006G270800
Gossypium raimondii
Gorai.006G270800
N
0.788
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.756
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.838
MTR_4g104020
Medicago truncatula
MTR_4g104020
N
0.764
mgf020930m
Mimulus guttatus
mgf020930m
N
0.810
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.868
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.830
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.942
30147.m013794
Ricinus communis
30147.m013794
N
0.835
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.838
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.838
TCM_014574
Theobroma cacao
TCM_014574
N
0.860
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.868