CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G270800
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.006G270800
T202636_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G270800.1
GRAS
142
522
LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQPPGTAVGRVQLPPVMNIMDIMSDSDKKQEAFRLVYEICPHIKFGHFVANLAILEAFEGESLVHVVDLGMTLGLPQGHQWRHLIQSLAAIRGGAGKPHCTRLRITAVGLCVDRFDVIGKDLKTYAKSMGINLEFNIVESNLENLKPENIKVSDDEVLVVNSILQLHCVVKESRGALNSVLQMIHELSPKLLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIVSCEGADRVERHERVDQWRRRMSRAGFQATPLRLMSQAKQWLGNNKVCEGYTVVEDKGCLVLGWNAKPIVAVSCWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_014574
Theobroma cacao
TCM_014574
N
0.846
30147.m013794
Ricinus communis
30147.m013794
N
0.810
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.805
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.805
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.805
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.799
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.799
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.799
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.797
Pm024459
Prunus mume
Pm024459
N
0.788
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.777
MTR_4g104020
Medicago truncatula
MTR_4g104020
N
0.761
Ca_08777
Cicer arietinum
Ca_08777
N
0.761
mgf020930m
Mimulus guttatus
mgf020930m
N
0.755
TCM_010708
Theobroma cacao
TCM_010708
N
0.750
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.747
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.747
GLYMA05G03020
Glycine max
GLYMA05G03020
N
0.731
GLYMA17G13680
Glycine max
GLYMA17G13680
N
0.728
Eucgr.H04688
Eucalyptus grandis
Eucgr.H04688
N
0.728
Cla019540
Citrullus lanatus
Cla019540
N
0.722
orange1.1g037028m.g
Citrus sinensis
orange1.1g037028m.g
N
0.720
PK09859.1
Cannabis sativa
PK09859.1
N
0.717
Cucsa.196250
Cucumis sativus
Cucsa.196250
N
0.714
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.703
Ciclev10031305m.g
Citrus clementina
Ciclev10031305m.g
N
0.701