CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA17G13680
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA17G13680
T200243_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA17G13680.1
GRAS
141
513
LVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLNLIQPIGSAGPMMAPAMNIMDAASDEMEEAYRLVYELCPHIQFGHYLANSTVLEAFEGESFVHVVDLGMSLGLRHGHQWRALIQSLANRASGERVRRLRITGVGLCVRLQTIGEELSVYANNLGINLEFSVVNKNLENLKPEDIEVREEEVLVVNSILQLHCVVKESRGALNSVLQMIHGLGPKVLVMVEQDSSHNGPFFLGRFMESLHYYSSIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQSKQWLLKNKVCEGYTVVEEKGCLVFGWKSRPIVAVSCWK
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA05G03020
Glycine max
GLYMA05G03020
N
0.953
Ca_08777
Cicer arietinum
Ca_08777
N
0.816
MTR_4g104020
Medicago truncatula
MTR_4g104020
N
0.794
TCM_014574
Theobroma cacao
TCM_014574
N
0.766
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.761
Pm024459
Prunus mume
Pm024459
N
0.758
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.758
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.758
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.755
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.753
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.750
30147.m013794
Ricinus communis
30147.m013794
N
0.742
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.739
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.731
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.731
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.731
Gorai.006G270800
Gossypium raimondii
Gorai.006G270800
N
0.728
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.718
mgf020930m
Mimulus guttatus
mgf020930m
N
0.717
PK09859.1
Cannabis sativa
PK09859.1
N
0.706