CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCM_014574
(
Theobroma cacao
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
TCM_014574
T201608_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY22397
GRAS
147
518
LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLALVQPLGTVGLVAPVMNIMDISSDKKEEALRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGMTLGLPHGHQWRHLIQSLANRAGKAPSRLRITAVGLSDHRFHIIGQELEAYAKDLGMNLEFSVVKSNLENLRPEDIKVFDGEVLVVNSILQLHCVVKESRGALNSVLQMIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIVSCEGPGRVERHERVDQWRRRMSRAGFQAAPLRMMTQAKQWLGKNKVCEGYTVVEDKGCLVLGWKSKPIVAASCWK
Links
Other
GRAS
family TFs
Other
Theobroma cacao
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m013794
Ricinus communis
30147.m013794
N
0.901
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.890
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.885
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.882
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.882
Pm024459
Prunus mume
Pm024459
N
0.860
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.846
Gorai.006G270800
Gossypium raimondii
Gorai.006G270800
N
0.846
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.838
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.835
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.835
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.813
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.810
mgf020930m
Mimulus guttatus
mgf020930m
N
0.810
Ca_08777
Cicer arietinum
Ca_08777
N
0.794
MTR_4g104020
Medicago truncatula
MTR_4g104020
N
0.786
TCM_010708
Theobroma cacao
TCM_010708
N
0.780
orange1.1g037028m.g
Citrus sinensis
orange1.1g037028m.g
N
0.777
GLYMA05G03020
Glycine max
GLYMA05G03020
N
0.769
GLYMA17G13680
Glycine max
GLYMA17G13680
N
0.766
Eucgr.H04688
Eucalyptus grandis
Eucgr.H04688
N
0.766
Cla019540
Citrullus lanatus
Cla019540
N
0.752
Cucsa.196250
Cucumis sativus
Cucsa.196250
N
0.752
Ciclev10031305m.g
Citrus clementina
Ciclev10031305m.g
N
0.745
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.745
PK09859.1
Cannabis sativa
PK09859.1
N
0.745
29929.m004746
Ricinus communis
29929.m004746
N
0.739
Lus10036932.g
Linum usitatissimum
Lus10036932.g
N
0.734
Lus10037055.g
Linum usitatissimum
Lus10037055.g
N
0.734
PRUPE_ppa026722mg
Prunus persica
PRUPE_ppa026722mg
N
0.717
Pm006846
Prunus mume
Pm006846
N
0.714
Sb03g010920
Sorghum bicolor
Sb03g010920
N
0.710