CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PRUPE_ppa026722mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa026722mg
T201304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ28354
GRAS
146
515
LVQQLIACAEAVACRDKAHASTLLYELRANAKVFGTSFQRVASCFVQGLSDRLALIQPLGAVGLIGPITKSTAFSAEKDEALHLVYEICPQIQFGHFVANASILEAFEGESSVHVIDLGMTLGLPHGYQWRNLIDSLANRAGQPLHRLRITGVGNSAERLQAIGNDLKLHAQSMKLNFEFSAVESSFENLKPQDFNLVDGDVLVVNSILQLHCLVKESRGALNSVLQTLHQLSPKLMILVEQDTSHNGPFFLGRFMEALHNYSAIFDSLDAMLPKYDTRRAKMEQFYFGEEIKNIVSCEGPARVERHERVEQWRRRMRRAGFQPAPLKMIAQAMKWLEINTCEGYTVVEDKGCLVFGWKSKPIIATSCWK
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm006846
Prunus mume
Pm006846
N
0.981
29929.m004746
Ricinus communis
29929.m004746
N
0.755
TCM_010708
Theobroma cacao
TCM_010708
N
0.747
Ciclev10031305m.g
Citrus clementina
Ciclev10031305m.g
N
0.745
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.734
Pm024459
Prunus mume
Pm024459
N
0.734
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.731
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.731
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.723
orange1.1g037028m.g
Citrus sinensis
orange1.1g037028m.g
N
0.720
TCM_014574
Theobroma cacao
TCM_014574
N
0.717
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.717
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.710
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.706
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.706
30147.m013794
Ricinus communis
30147.m013794
N
0.706
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.706
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.703
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.703