POPTR_0012s09550 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0012s09550 T201228_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s09550.1 GRAS 144 515

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0015s10310 Populus trichocarpa POPTR_0015s10310 N 0.887
cassava33470.m1 Manihot esculenta cassava33470.m1 N 0.887
TCM_014574 Theobroma cacao TCM_014574 N 0.885
30147.m013794 Ricinus communis 30147.m013794 N 0.879
gene22702-v1.0-hybrid Fragaria vesca gene22702-v1.0-hybrid N 0.863
PRUPE_ppa016418mg Prunus persica PRUPE_ppa016418mg N 0.860
Pm024459 Prunus mume Pm024459 N 0.830
VIT_17s0000g10300 Vitis vinifera VIT_17s0000g10300 N 0.827
Ciclev10019777m.g Citrus clementina Ciclev10019777m.g N 0.824
orange1.1g040125m.g Citrus sinensis orange1.1g040125m.g N 0.824
Gorai.006G270800 Gossypium raimondii Gorai.006G270800 N 0.805
mgf020930m Mimulus guttatus mgf020930m N 0.802
Ca_08777 Cicer arietinum Ca_08777 N 0.786
Solyc03g110950.1 Solanum lycopersicum Solyc03g110950.1 N 0.783
PGSC0003DMG400015255 Solanum tuberosum PGSC0003DMG400015255 N 0.780
MTR_4g104020 Medicago truncatula MTR_4g104020 N 0.772
Eucgr.H04688 Eucalyptus grandis Eucgr.H04688 N 0.769
orange1.1g037028m.g Citrus sinensis orange1.1g037028m.g N 0.769
TCM_010708 Theobroma cacao TCM_010708 N 0.766
GLYMA05G03020 Glycine max GLYMA05G03020 N 0.745
PK09859.1 Cannabis sativa PK09859.1 N 0.742
GLYMA17G13680 Glycine max GLYMA17G13680 N 0.739
Lus10017930.g Linum usitatissimum Lus10017930.g N 0.739
Cla019540 Citrullus lanatus Cla019540 N 0.738
Ciclev10031305m.g Citrus clementina Ciclev10031305m.g N 0.736
29929.m004746 Ricinus communis 29929.m004746 N 0.731
Cucsa.196250 Cucumis sativus Cucsa.196250 N 0.731
Lus10036932.g Linum usitatissimum Lus10036932.g N 0.731
Lus10037055.g Linum usitatissimum Lus10037055.g N 0.731
PRUPE_ppa026722mg Prunus persica PRUPE_ppa026722mg N 0.706
Pavir.J35085 Panicum virgatum Pavir.J35085 N 0.704
Pm006846 Prunus mume Pm006846 N 0.703