CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf013039m
(
Mimulus guttatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
mgf013039m
T202203_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf013039m
GRAS
134
494
LKQVLIACAKAVSNDDVPTSQRLMSELRQLVSVSGEPLQRLGAYMLEGLVARVSSSGRFLYKSREPVNRQLLSYTQLLHEACPYFKYGYMSANGAIAEAMKDEERVHIIDFQIGQGSQWVPLIQAFAARPGGPPRIRITGIDDATSAYAPRGSGSNIVGRRLSKLAKSFKVPFEFNSSSGAHLENLVTQSGQKEALAVNFAFVLHRTPDESVSTVLRMVKRLNPKVVTLVEQELNTNTAAFYPRFLETLDYYTAMFESIDVTVSREDKERINMEQHCLARDVVNVIACEGGERVERHETLGKWKSRFKMAGFRQFPLSSLVNGTIKKLMESWCNRFSVEERDGALYLGWLNRDLVAASAWK
Links
Other
GRAS
family TFs
Other
Mimulus guttatus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
0.705
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.713
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
0.702
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.707
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.744
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.724
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.710
MDP0000804652
Malus domestica
MDP0000804652
N
0.716
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.702
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.733
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.710
29949.m000124
Ricinus communis
29949.m000124
N
0.731
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.713
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.732
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.734
TCM_002319
Theobroma cacao
TCM_002319
N
0.707
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.702