CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aquca_005_00234
(
Aquilegia coerulea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Aquca_005_00234
T202237_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_005_00234.1
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.2
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.3
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.4
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.5
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.6
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Links
Other
GRAS
family TFs
Other
Aquilegia coerulea
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_42450
Aegilops tauschii
F775_42450
I
0.000
fgenesh2_kg.6__2677__AT5G27880.1
Arabidopsis lyrata
fgenesh2_kg.6__2677__AT5G27880.1
N
0.000
ZFP5
Arabidopsis thaliana
AT1G10480
D
0.000
Bostr.29827s0107
Boechera stricta
Bostr.29827s0107
N
0.000
Bostr.2902s0137
Boechera stricta
Bostr.2902s0137
I
0.000
Bostr.13671s0437
Boechera stricta
Bostr.13671s0437
I
0.000
BRADI4G37760
Brachypodium distachyon
BRADI4G37760
I
0.000
Bo2g155500
Brassica oleracea
Bo2g155500
N
0.000
Bo9g166240
Brassica oleracea
Bo9g166240
I
0.000
Bo9g011450
Brassica oleracea
Bo9g011450
I
0.000
Bo8g109510
Brassica oleracea
Bo8g109510
I
0.000
Bra020571
Brassica rapa
Bra020571
N
0.000
Bra008787
Brassica rapa
Bra008787
I
0.000
Cagra.3166s0007
Capsella grandiflora
Cagra.3166s0007
I
0.000
Carubv10018785m.g
Capsella rubella
Carubv10018785m.g
I
0.000
Carubv10002570m.g
Capsella rubella
Carubv10002570m.g
I
0.000
evm.TU.supercontig_1307.1
Carica papaya
evm.TU.supercontig_1307.1
I
0.000
Ca_23376
Cicer arietinum
Ca_23376
N
0.000
Thhalv10008773m.g
Eutrema salsugineum
Thhalv10008773m.g
I
0.000
Thhalv10015891m.g
Eutrema salsugineum
Thhalv10015891m.g
I
0.000
gene05263-v1.0-hybrid
Fragaria vesca
gene05263-v1.0-hybrid
I
0.000
Lus10017229.g
Linum usitatissimum
Lus10017229.g
I
0.000
chr5.LjT04G07.90.nd
Lotus japonicus
chr5.LjT04G07.90.nd
I
0.000
MDP0000166683
Malus domestica
MDP0000166683
I
0.000
MDP0000165710
Malus domestica
MDP0000165710
I
0.000
MDP0000121370
Malus domestica
MDP0000121370
I
0.000
cassava45710.m1
Manihot esculenta
cassava45710.m1
I
0.000
MTR_2g067740
Medicago truncatula
MTR_2g067740
N
0.000
Pavir.Ib01803
Panicum virgatum
Pavir.Ib01803
I
0.000
Pavir.Ia03096
Panicum virgatum
Pavir.Ia03096
I
0.000
Pm008291
Prunus mume
Pm008291
I
0.000
30076.m004693
Ricinus communis
30076.m004693
I
0.000
SapurV1A.0052s0050
Salix purpurea
SapurV1A.0052s0050
I
0.000
SELMODRAFT_450817
Selaginella moellendorffii
SELMODRAFT_450817
I
0.000
SELMODRAFT_405785
Selaginella moellendorffii
SELMODRAFT_405785
I
0.000
SELMODRAFT_450813
Selaginella moellendorffii
SELMODRAFT_450813
I
0.000
SELMODRAFT_450828
Selaginella moellendorffii
SELMODRAFT_450828
I
0.000
SELMODRAFT_450830
Selaginella moellendorffii
SELMODRAFT_450830
I
0.000
SELMODRAFT_450832
Selaginella moellendorffii
SELMODRAFT_450832
I
0.000
SELMODRAFT_450839
Selaginella moellendorffii
SELMODRAFT_450839
I
0.000
Si037914m.g
Setaria italica
Si037914m.g
I
0.000
Solyc10g078970.1
Solanum lycopersicum
Solyc10g078970.1
I
0.000
Solyc10g078990.1
Solanum lycopersicum
Solyc10g078990.1
I
0.000
PGSC0003DMG400011450
Solanum tuberosum
PGSC0003DMG400011450
I
0.000
Traes_5DL_DD8A0F6BE
Triticum aestivum
Traes_5DL_DD8A0F6BE
I
0.000
GRMZM2G703281
Zea mays
GRMZM2G703281
I
0.000
GRMZM2G161255
Zea mays
GRMZM2G161255
I
0.000