Pavir.Ib01878 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ib01878 T203031_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01878.1.p GRAS 1 390

Links

Other GRAS family TFs
Other Panicum virgatum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G23060 Brachypodium distachyon BRADI1G23060 N 0.757
MLOC_62665 Hordeum vulgare MLOC_62665 N 0.780
LPERR07G17740 Leersia perrieri LPERR07G17740 N 0.855
GSMUA_Achr4G16460_001 Musa acuminata GSMUA_Achr4G16460_001 N 0.710
GSMUA_Achr8G30950_001 Musa acuminata GSMUA_Achr8G30950_001 N 0.701
OBART07G20430 Oryza barthii OBART07G20430 N 0.766
OB03G31410 Oryza brachyantha OB03G31410 N 0.816
OB07G26110 Oryza brachyantha OB07G26110 N 0.786
ORGLA07G0156800 Oryza glaberrima ORGLA07G0156800 N 0.852
ORGLA03G0208800 Oryza glaberrima ORGLA03G0208800 N 0.858
OGLUM07G20210 Oryza glumaepatula OGLUM07G20210 N 0.855
OGLUM03G23190 Oryza glumaepatula OGLUM03G23190 N 0.858
SHR1 Oryza indica BGIOSGA026037 N 0.852
SHR2 Oryza indica BGIOSGA010480 N 0.858
OMERI03G20220 Oryza meridionalis OMERI03G20220 N 0.811
OMERI07G17100 Oryza meridionalis OMERI07G17100 N 0.797
ONIVA07G18840 Oryza nivara ONIVA07G18840 N 0.852
ONIVA03G24000 Oryza nivara ONIVA03G24000 N 0.858
OPUNC03G21050 Oryza punctata OPUNC03G21050 N 0.797
OPUNC07G19280 Oryza punctata OPUNC07G19280 N 0.794
ORUFI03G23130 Oryza rufipogon ORUFI03G23130 N 0.858
ORUFI07G21310 Oryza rufipogon ORUFI07G21310 N 0.855
SHR2 Oryza sativa OS03G0433200 N 0.808
SHR1 Oryza sativa OS07G0586900 N 0.855
Pavir.Ia02979 Panicum virgatum Pavir.Ia02979 N 0.873
Pavir.Bb01182 Panicum virgatum Pavir.Bb01182 N 0.846
Pavir.Ba01071 Panicum virgatum Pavir.Ba01071 N 0.797
Si029296m.g Setaria italica Si029296m.g N 0.797
Si034653m.g Setaria italica Si034653m.g N 0.862
Sb02g037890 Sorghum bicolor Sb02g037890 N 0.858
Traes_2AS_D0B21BF981 Triticum aestivum Traes_2AS_D0B21BF981 N 0.870
Traes_2BS_736EF207B1 Triticum aestivum Traes_2BS_736EF207B1 N 0.786
Traes_2DS_3B4535629 Triticum aestivum Traes_2DS_3B4535629 N 0.827
GRMZM2G019060 Zea mays GRMZM2G019060 N 0.786
GRMZM2G132794 Zea mays GRMZM2G132794 N 0.848
GRMZM2G172657 Zea mays GRMZM2G172657 N 0.855