CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10011379m.g
(
Eutrema salsugineum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Thhalv10011379m.g
T203200_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10011379m
GRAS
163
533
LRGMLYECAKAVENYDVAMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLIARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPRVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFNGAALCCTEVEMEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKRLSPSVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGLEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR
Links
Other
GRAS
family TFs
Other
Eutrema salsugineum
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM021613
Anopheles maculatus
AMAM021613
I
0.000
AMAM009961
Anopheles maculatus
AMAM009961
I
0.000
BGIBMGA010300
Bombyx mori
BGIBMGA010300
I
0.000
BXY_0883500
Bursaphelenchus xylophilus
BXY_0883500
I
0.000
POU5F1
Callithrix jacchus
ENSCJAG00000019789
I
0.000
Cflo_05860--XP_394134.2_APIME
Camponotus floridanus
Cflo_05860--XP_394134.2_APIME
I
0.000
Cmyd_10006628
Chelonia mydas
Cmyd_10006628
I
0.000
ENSCING00000013609
Ciona intestinalis
ENSCING00000013609
I
0.000
ENSCSAVG00000007148
Ciona savignyi
ENSCSAVG00000007148
I
0.000
DAPPUDRAFT_9350
Daphnia pulex
DAPPUDRAFT_9350
I
0.000
acj6
Drosophila melanogaster
FBgn0000028
D
0.000
ECPE_0001547101
Echinostoma caproni
ECPE_0001547101
N
0.000
GPUH_0000951201
Gongylonema pulchrum
GPUH_0000951201
I
0.000
HelroG138303
Helobdella robusta
HelroG138303
I
0.000
POU6F1
Homo sapiens
ENSG00000184271
D
0.000
POU2F2
Homo sapiens
ENSG00000028277
D
0.000
MESCA009897
Megaselia scalaris
MESCA009897
I
0.000
Ogr05710
Ophisaurus gracilis
Ogr05710
I
0.000
ENSOANG00000013329
Ornithorhynchus anatinus
ENSOANG00000013329
I
0.000
PPAI004106
Phlebotomus papatasi
PPAI004106
I
0.000
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
0.000
SMTD_0002076601
Schistosoma mattheei
SMTD_0002076601
I
0.000
SROB_0001854701
Schistosoma rodhaini
SROB_0001854701
I
0.000
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I
0.000
L898_g18190
Steinernema monticolum
L898_g18190
I
0.000
EFV49290
Trichinella spiralis
EFV49290
I
0.000
L798_02028
Zootermopsis nevadensis
L798_02028
I
0.000