CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g055280
(
Brassica oleracea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Bo3g055280
T204895_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g055280.1
Homeodomain
13
54
VDEENLSAGTREEDKTSLKHWGCMQPRQIAVWFQNRRARWKT
Links
Other
Homeodomain
family TFs
Other
Brassica oleracea
TFs
465 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_15419
Aegilops tauschii
F775_15419
I
0.000
F775_25503
Aegilops tauschii
F775_25503
I
0.000
BRADI4G35570
Brachypodium distachyon
BRADI4G35570
N
0.000
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.000
MLOC_54227
Hordeum vulgare
MLOC_54227
I
0.000
MLOC_59224
Hordeum vulgare
MLOC_59224
I
0.000
LPERR06G01360
Leersia perrieri
LPERR06G01360
N
0.000
DREB1C
Oryza indica
BGIOSGA022219
N
0.000
OMERI06G01670
Oryza meridionalis
OMERI06G01670
N
0.000
ONIVA06G01850
Oryza nivara
ONIVA06G01850
N
0.000
OPUNC06G01430
Oryza punctata
OPUNC06G01430
N
0.000
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.000
ORUFI06G01550
Oryza rufipogon
ORUFI06G01550
N
0.000
DREB1C
Oryza sativa
OS06G0127100
N
0.000
Pavir.J35991
Panicum virgatum
Pavir.J35991
N
0.000
Si007199m.g
Setaria italica
Si007199m.g
N
0.000
Sb02g030300
Sorghum bicolor
Sb02g030300
I
0.000
Sb10g001620
Sorghum bicolor
Sb10g001620
N
0.000
Q3T5M9_WHEAT
Triticum aestivum
Q3T5M9_WHEAT
D
0.000
Q8W236_WHEAT
Triticum aestivum
Q8W236_WHEAT
D
0.000
Traes_5BL_199A847E4
Triticum aestivum
Traes_5BL_199A847E4
I
0.000
Traes_5BL_B6A784025
Triticum aestivum
Traes_5BL_B6A784025
I
0.000
Traes_5BL_B795CE108
Triticum aestivum
Traes_5BL_B795CE108
I
0.000
Traes_5DL_62A4CE1CC
Triticum aestivum
Traes_5DL_62A4CE1CC
I
0.000
Traes_5DL_BFA40F938
Triticum aestivum
Traes_5DL_BFA40F938
I
0.000
TRIUR3_21819
Triticum urartu
TRIUR3_21819
I
0.000
TRIUR3_29805
Triticum urartu
TRIUR3_29805
I
0.000
GRMZM2G380377
Zea mays
GRMZM2G380377
N
0.000