GRMZM2G047715 (Zea mays)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GRMZM2G047715 T218970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.832 0.789
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.791 0.754
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.791 0.754
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.776 0.754
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.776 0.754
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.776 0.754
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.776 0.754
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.776 0.754
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.734 0.754
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.734 0.737
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.734 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G047715_P01 Homeodomain 179 235

Links

Other Homeodomain family TFs
Other Zea mays TFs

695 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.000
nAv.1.0.1.g08553 Acanthocheilonema viteae nAv.1.0.1.g08553 I 0.000
ANCCAN_26651 Ancylostoma caninum ANCCAN_26651 I 0.000
ANCDUO_13021 Ancylostoma duodenale ANCDUO_13021 I 0.000
ACAC_0000977101 Angiostrongylus cantonensis ACAC_0000977101 I 0.000
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.000
ASIM_0001219601 Anisakis simplex ASIM_0001219601 I 0.000
ALUE_0001111401 Ascaris lumbricoides ALUE_0001111401 I 0.000
ASU_13433 Ascaris suum ASU_13433 I 0.000
ASU_10605 Ascaris suum ASU_10605 I 0.000
Bm11291 Brugia malayi Bm11291 I 0.000
Bm5359 Brugia malayi Bm5359 I 0.000
BTMF_0000952301 Brugia timori BTMF_0000952301 I 0.000
BXY_1538500 Bursaphelenchus xylophilus BXY_1538500 I 0.000
CBN31444 Caenorhabditis brenneri CBN31444 I 0.000
CBG09090 Caenorhabditis briggsae CBG09090 I 0.000
sma-4 Caenorhabditis elegans WBGene00004858 D 0.000
CJA09693 Caenorhabditis japonica CJA09693 I 0.000
CRE04707 Caenorhabditis remanei CRE04707 I 0.000
CGOC_0000897101 Cylicostephanus goldi CGOC_0000897101 I 0.000
DICVIV_05422 Dictyocaulus viviparus DICVIV_05422 I 0.000
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.000
nDi.2.2.2.g06233 Dirofilaria immitis nDi.2.2.2.g06233 I 0.000
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.000
EVEC_0000562301 Enterobius vermicularis EVEC_0000562301 I 0.000
GPLIN_000764400 Globodera pallida GPLIN_000764400 I 0.000
GPUH_0001294301 Gongylonema pulchrum GPUH_0001294301 I 0.000
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.000
HCOI01928500 Haemonchus contortus HCOI01928500 I 0.000
HCOI02014300 Haemonchus contortus HCOI02014300 I 0.000
HPBE_0002536701 Heligmosomoides bakeri HPBE_0002536701 I 0.000
Hba_14016 Heterorhabditis bacteriophora Hba_14016 I 0.000
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.000
nLs.2.1.2.g01829 Litomosoides sigmodontis nLs.2.1.2.g01829 I 0.000
LOAG_05337 Loa loa LOAG_05337 I 0.000
maker-nMf.1.1.scaf05118-snap-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf05118-snap-gene-0.7 I 0.000
Minc10272 Meloidogyne incognita Minc10272 I 0.000
Minc06316 Meloidogyne incognita Minc06316 I 0.000
NBR_0001377901 Nippostrongylus brasiliensis NBR_0001377901 I 0.000
nOo.2.0.1.g06266 Onchocerca ochengi nOo.2.0.1.g06266 I 0.000
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.000
WBGene00245700 Onchocerca volvulus WBGene00245700 I 0.000
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.000
PTRK_0001020700 Parastrongyloides trichosuri PTRK_0001020700 I 0.000
scaffold21-EXSNAP2012.60 Pristionchus exspectatus scaffold21-EXSNAP2012.60 I 0.000
Ppa-sma-4 Pristionchus pacificus PPA17857 I 0.000
RSKR_0000114900 Rhabditophanes kr3021 RSKR_0000114900 I 0.000
L596_g26024 Steinernema carpocapsae L596_g26024 I 0.000
L889_g22387 Steinernema feltiae L889_g22387 I 0.000
L893_g15056 Steinernema glaseri L893_g15056 I 0.000
L892_g4495 Steinernema scapterisci L892_g4495 I 0.000
SPAL_0001099400 Strongyloides papillosus SPAL_0001099400 I 0.000
SSTP_0000769000 Strongyloides stercoralis SSTP_0000769000 I 0.000
SVE_0858500 Strongyloides venezuelensis SVE_0858500 I 0.000
TELCIR_06960 Teladorsagia circumcincta TELCIR_06960 I 0.000
TELCIR_11814 Teladorsagia circumcincta TELCIR_11814 I 0.000
TCLT_0000412001 Thelazia callipaeda TCLT_0000412001 I 0.000
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.000
D918_00298 Trichuris suis D918_00298 I 0.000
WUBG_08631 Wuchereria bancrofti WUBG_08631 I 0.000