ISCW005966 (Ixodes scapularis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ISCW005966 T219683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.730 0.391
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.730 0.391
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.730 0.391
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.730 0.391
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.730 0.391
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.730 0.391
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.730 0.391
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.730 0.391
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.730 0.391
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.691 0.435
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.691 0.435
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.691 0.435
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW005966-PA Homeodomain 174 219

Links

Other Homeodomain family TFs
Other Ixodes scapularis TFs

1227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004033 Aedes aegypti AAEL004033 N 0.000
ENSAMEG00000003692 Ailuropoda melanoleuca ENSAMEG00000003692 I 0.000
Alligator_sinensis_CCG001589.1 Alligator sinensis Alligator_sinensis_CCG001589.1 I 0.000
ENSAPLG00000005538 Anas platyrhynchos ENSAPLG00000005538 I 0.000
ANCDUO_24100 Ancylostoma duodenale ANCDUO_24100 N 0.000
ASIM_0001695301 Anisakis simplex ASIM_0001695301 N 0.000
AALB008452 Anopheles albimanus AALB008452 N 0.000
AARA011457 Anopheles arabiensis AARA011457 I 0.663
AATE008437 Anopheles atroparvus AATE008437 N 0.000
ACUA026159 Anopheles culicifacies ACUA026159 N 0.000
ADIR006386 Anopheles dirus ADIR006386 N 0.000
AEPI002734 Anopheles epiroticus AEPI002734 N 0.000
AFAF005788 Anopheles farauti AFAF005788 N 0.000
AFUN008465 Anopheles funestus AFUN008465 I 0.663
AMAM013696 Anopheles maculatus AMAM013696 N 0.000
AMEC008489 Anopheles melas AMEC008489 I 0.663
AMEC022035 Anopheles melas AMEC022035 N 0.000
AMEM013182 Anopheles merus AMEM013182 N 0.000
AMIN002697 Anopheles minimus AMIN002697 N 0.000
AQUA009532 Anopheles quadriannulatus AQUA009532 N 0.000
ASIS009140 Anopheles sinensis ASIS009140 I 0.663
ASIS022603 Anopheles sinensis ASIS022603 N 0.000
Afo_R002915 Aptenodytes forsteri Afo_R002915 N 0.000
ENSAMXG00000001095 Astyanax mexicanus ENSAMXG00000001095 I 0.000
ACEP17328 Atta cephalotes ACEP17328 N 0.000
BGIBMGA010051 Bombyx mori BGIBMGA010051 N 0.000
ENSBTAP00000003266-D2 Bos grunniens ENSBTAP00000003266-D2 I 0.000
NKX6-1 Bos taurus ENSBTAG00000002518 I 0.000
estExt_GenewiseH_1.C_2940047 Branchiostoma floridae estExt_GenewiseH_1.C_2940047 I 0.000
Bm5188 Brugia malayi Bm5188 N 0.000
NKX6-1 Callithrix jacchus ENSCJAG00000005335 I 0.000
NKX6-1 Canis familiaris ENSCAFG00000009157 I 0.000
CapteG6193 Capitella teleta CapteG6193 N 0.000
ENSCPOG00000026192 Cavia porcellus ENSCPOG00000026192 I 0.000
ENSCSAG00000004373 Chlorocebus sabaeus ENSCSAG00000004373 I 0.000
CLEC002616 Cimex lectularius CLEC002616 N 0.000
CLEC013163 Cimex lectularius CLEC013163 I 0.665
CpipJ_CPIJ001077 Culex pipiens CpipJ_CPIJ001077 I 0.663
CpipJ_CPIJ001377 Culex pipiens CpipJ_CPIJ001377 N 0.000
CPIJ001077 Culex quinquefasciatus CPIJ001077 I 0.663
CPIJ001377 Culex quinquefasciatus CPIJ001377 N 0.000
KGM_13904 Danaus plexippus KGM_13904 N 0.000
nkx6.1 Danio rerio ENSDARG00000022569 I 0.000
NKX6-1 Dasypus novemcinctus ENSDNOG00000014879 I 0.000
YQE_09155 Dendroctonus ponderosae YQE_09155 N 0.000
DICVIV_02945 Dictyocaulus viviparus DICVIV_02945 N 0.000
Nkx6-1 Dipodomys ordii ENSDORG00000004413 I 0.000
ECPE_0000358001 Echinostoma caproni ECPE_0000358001 N 0.000
EVEC_0000660801 Enterobius vermicularis EVEC_0000660801 N 0.000
ENSECAG00000018325 Equus caballus ENSECAG00000018325 I 0.000
NKX6-1 Equus caballus ENSECAG00000021703 I 0.000
ENSFCAG00000028918 Felis catus ENSFCAG00000028918 I 0.000
ENSFALG00000005328 Ficedula albicollis ENSFALG00000005328 I 0.000
ENSGMOG00000012973 Gadus morhua ENSGMOG00000012973 I 0.000
nkx6.1 Gasterosteus aculeatus ENSGACG00000013430 I 0.000
Gfo_R008628 Geospiza fortis Gfo_R008628 I 0.000
NKX6-1 Gorilla gorilla ENSGGOG00000008459 I 0.000
HHAL002696-PA Halyomorpha halys HHAL002696-PA I 0.665
HHAL007703-PA Halyomorpha halys HHAL007703-PA N 0.000
Hsal_06171--XP_001121097.1_APIME Harpegnathos saltator Hsal_06171--XP_001121097.1_APIME N 0.000
NKX6-1 Homo sapiens ENSG00000163623 D 0.000
ENSSTOG00000012588 Ictidomys tridecemlineatus ENSSTOG00000012588 I 0.000
ISCW002094 Ixodes scapularis ISCW002094 I 0.663
ISCW014430 Ixodes scapularis ISCW014430 N 0.000
ENSLACG00000010778 Latimeria chalumnae ENSLACG00000010778 I 0.000
ENSLOCG00000012142 Lepisosteus oculatus ENSLOCG00000012142 I 0.000
LDEC017209 Leptinotarsa decemlineata LDEC017209 N 0.000
nLs.2.1.2.g06018 Litomosoides sigmodontis nLs.2.1.2.g06018 N 0.000
ENSLAFG00000030127 Loxodonta africana ENSLAFG00000030127 I 0.000
LCUP008694 Lucilia cuprina LCUP008694 N 0.000
LCUP012257 Lucilia cuprina LCUP012257 I 0.663
ENSMMUP00000027862 Macaca fascicularis ENSMMUP00000027862 I 0.000
ENSMMUG00000021161 Macaca mulatta ENSMMUG00000021161 I 0.000
ENSMEUG00000004857 Macropus eugenii ENSMEUG00000004857 I 0.000
ENSMEUG00000009353 Macropus eugenii ENSMEUG00000009353 I 0.000
MESCA000156 Megaselia scalaris MESCA000156 I 0.663
MCINX004710 Melitaea cinxia MCINX004710 N 0.000
augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0 N 0.000
ENSMICG00000006922 Microcebus murinus ENSMICG00000006922 I 0.000
NKX6-1 Monodelphis domestica ENSMODG00000020778 I 0.000
ENSMPUG00000010488 Mustela putorius furo ENSMPUG00000010488 I 0.000
Nkx6-1 Mus musculus ENSMUSG00000035187 D 0.000
Myotis_brandtii_NKX6_10030510 Myotis brandtii Myotis_brandtii_NKX6_10030510 N 0.000
NKX6-1 Myotis lucifugus ENSMLUG00000012584 I 0.000
ENSNLEG00000009157 Nomascus leucogenys ENSNLEG00000009157 I 0.000
Ocbimv22025901m.g Octopus bimaculoides Ocbimv22025901m.g N 0.000
OFLC_0001516501 Onchocerca flexuosa OFLC_0001516501 N 0.000
nOo.2.0.1.g02038 Onchocerca ochengi nOo.2.0.1.g02038 I 0.668
Ogr08540 Ophisaurus gracilis Ogr08540 I 0.000
ENSONIG00000012511 Oreochromis niloticus ENSONIG00000012511 I 0.000
ENSOANG00000006212 Ornithorhynchus anatinus ENSOANG00000006212 I 0.000
NKX6-1 Oryctolagus cuniculus ENSOCUG00000028183 I 0.000
ENSORLG00000019018 Oryzias latipes ENSORLG00000019018 I 0.000
NKX6-1 Otolemur garnettii ENSOGAG00000000028 I 0.000
ENSOARG00000007317 Ovis aries ENSOARG00000007317 N 0.000
NKX6-1 Pan troglodytes ENSPTRG00000016239 I 0.000
ENSPANG00000025577 Papio anubis ENSPANG00000025577 I 0.000
PHUM359870 Pediculus humanus PHUM359870 N 0.000
ENSPSIG00000015332 Pelodiscus sinensis ENSPSIG00000015332 I 0.000
PPAI007703 Phlebotomus papatasi PPAI007703 N 0.000
ENSPFOG00000002761 Poecilia formosa ENSPFOG00000002761 I 0.000
ENSPPYG00000014901 Pongo abelii ENSPPYG00000014901 I 0.000
scaffold37-EXSNAP2012.8 Pristionchus exspectatus scaffold37-EXSNAP2012.8 N 0.000
Ppa-cog-1 Pristionchus pacificus PPA04716 N 0.000
NKX6-2 Procavia capensis ENSPCAG00000000708 N 0.000
PXEA_0000446101 Protopolystoma xenopodis PXEA_0000446101 N 0.000
Nkx6-1 Rattus norvegicus ENSRNOG00000002149 I 0.000
RPRC003712 Rhodnius prolixus RPRC003712 I 0.663
nRc.2.0.1.g06912 Romanomermis culicivorax nRc.2.0.1.g06912 N 0.000
ENSSHAG00000002937 Sarcophilus harrisii ENSSHAG00000002937 I 0.000
ENSSHAG00000014919 Sarcophilus harrisii ENSSHAG00000014919 I 0.000
SCUD_0002097601 Schistosoma curassoni SCUD_0002097601 N 0.000
A_02867 Schistosoma haematobium A_02867 N 0.000
Sjc_0111830 Schistosoma japonicum Sjc_0111830 N 0.000
SROB_0001257001 Schistosoma rodhaini SROB_0001257001 N 0.000
SINV25324 Solenopsis invicta SINV25324 I 0.000
NKX6-1 Sus scrofa ENSSSCG00000009232 I 0.000
ENSTGUG00000002130 Taeniopygia guttata ENSTGUG00000002130 I 0.000
nkx6.1 Takifugu rubripes ENSTRUG00000002910 I 0.000
ENSTRUG00000018647 Takifugu rubripes ENSTRUG00000018647 I 0.000
nkx6.1 Takifugu rubripes ENSTRUG00000018648 I 0.000
ENSTSYG00000009252 Tarsius syrichta ENSTSYG00000009252 I 0.000
nkx6.1 Tetraodon nigroviridis ENSTNIG00000009010 I 0.000
TCNE_0001839401 Toxocara canis TCNE_0001839401 N 0.000
D917_05078 Trichinella nativa D917_05078 N 0.000
D917_08408 Trichinella nativa D917_08408 N 0.000
TRE_0000644601 Trichobilharzia regenti TRE_0000644601 N 0.000
NKX6-1 Tursiops truncatus ENSTTRG00000001971 I 0.000
WUBG_08661 Wuchereria bancrofti WUBG_08661 N 0.000
nkx6-1.L Xenopus laevis XB-GENE-864993 I 0.000
nkx6-1 Xenopus tropicalis XB-GENE-483574 I 0.000
ENSXMAG00000012212 Xiphophorus maculatus ENSXMAG00000012212 I 0.000