MLOC_18998 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_18998 T220680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.848 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_18998.1 Homeodomain 18 78

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.647
Ca_12172 Cicer arietinum Ca_12172 I 0.635
Ca_02034 Cicer arietinum Ca_02034 I 0.647
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.643
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.674
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.657
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.643
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.643
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.848
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.627
MDP0000804580 Malus domestica MDP0000804580 I 0.644
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.713
mgf024641m Mimulus guttatus mgf024641m I 0.625
mgf026503m Mimulus guttatus mgf026503m I 0.630
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.848
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.848
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.848
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.848
ZHD7 Oryza sativa OS02G0706600 D 0.848
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.825
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.825
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.708
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.634
29983.m003297 Ricinus communis 29983.m003297 I 0.713
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.708
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.731
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.731
Si020227m.g Setaria italica Si020227m.g I 0.826
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.825
TCM_001660 Theobroma cacao TCM_001660 I 0.643
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.825