OMERI02G28440 (Oryza meridionalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OMERI02G28440 T221558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.867 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI02G28440.1 Homeodomain 327 387

Links

Other Homeodomain family TFs
Other Oryza meridionalis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.651
Ca_12172 Cicer arietinum Ca_12172 I 0.630
Ca_02034 Cicer arietinum Ca_02034 I 0.642
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.638
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.673
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.652
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.638
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.638
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.848
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.867
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.622
MDP0000804580 Malus domestica MDP0000804580 I 0.639
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.708
mgf024641m Mimulus guttatus mgf024641m I 0.625
mgf026503m Mimulus guttatus mgf026503m I 0.629
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.867
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.867
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.867
ZHD7 Oryza sativa OS02G0706600 D 0.867
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.829
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.829
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.704
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.629
29983.m003297 Ricinus communis 29983.m003297 I 0.708
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.704
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.726
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.726
Si020227m.g Setaria italica Si020227m.g I 0.835
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.843
TCM_001660 Theobroma cacao TCM_001660 I 0.638
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.843