CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.032420
(
Cucumis sativus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cucsa.032420
T227161_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.032420.1
Homeodomain
11
76
AFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Cucsa.032420.2
Homeodomain
8
55
HNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Cucsa.032420.3
Homeodomain
8
55
HNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Cucsa.032420.4
Homeodomain
8
55
HNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRA
Links
Other
Homeodomain
family TFs
Other
Cucumis sativus
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000752
Ailuropoda melanoleuca
ENSAMEG00000000752
I
0.000
ENSAMEG00000003872
Ailuropoda melanoleuca
ENSAMEG00000003872
I
0.000
Alligator_sinensis_CCG018668.1
Alligator sinensis
Alligator_sinensis_CCG018668.1
I
0.000
Alligator_sinensis_CCG020455.1
Alligator sinensis
Alligator_sinensis_CCG020455.1
I
0.000
ENSAPLG00000002385
Anas platyrhynchos
ENSAPLG00000002385
I
0.000
ZNF143
Anolis carolinensis
ENSACAG00000009338
I
0.000
Afo_R002092
Aptenodytes forsteri
Afo_R002092
I
0.000
Afo_R014591
Aptenodytes forsteri
Afo_R014591
I
0.000
ENSAMXG00000003833
Astyanax mexicanus
ENSAMXG00000003833
I
0.000
ENSAMXG00000008869
Astyanax mexicanus
ENSAMXG00000008869
I
0.000
BGLB001048
Biomphalaria glabrata
BGLB001048
I
0.000
ENSBTAP00000008112-D1
Bos grunniens
ENSBTAP00000008112-D1
I
0.000
ENSP00000379847-D1
Bos grunniens
ENSP00000379847-D1
I
0.000
ZNF76
Bos taurus
ENSBTAG00000006170
I
0.000
estExt_fgenesh2_pg.C_1970081
Branchiostoma floridae
estExt_fgenesh2_pg.C_1970081
I
0.000
Brh_R005520
Buceros rhinoceros
Brh_R005520
I
0.000
ZNF143
Callithrix jacchus
ENSCJAG00000011327
I
0.000
ZNF76
Callithrix jacchus
ENSCJAG00000015519
I
0.000
Aan_R006576
Calypte anna
Aan_R006576
I
0.000
ZNF76
Canis familiaris
ENSCAFG00000001304
I
0.000
ZNF143
Canis familiaris
ENSCAFG00000007373
I
0.000
ZNF143
Cavia porcellus
ENSCPOG00000003109
I
0.000
ZNF76
Cavia porcellus
ENSCPOG00000007381
I
0.000
Cmyd_10011173
Chelonia mydas
Cmyd_10011173
I
0.000
ENSCSAG00000004520
Chlorocebus sabaeus
ENSCSAG00000004520
I
0.000
ENSCSAG00000009955
Chlorocebus sabaeus
ENSCSAG00000009955
I
0.000
ZNF76
Choloepus hoffmanni
ENSCHOG00000003197
I
0.000
znf76
Danio rerio
ENSDARG00000013279
I
0.000
znf143b
Danio rerio
ENSDARG00000041581
I
0.000
ZNF76
Dasypus novemcinctus
ENSDNOG00000015856
I
0.000
ZNF76
Equus caballus
ENSECAG00000014843
I
0.000
ZNF143
Equus caballus
ENSECAG00000018889
I
0.000
ZNF143
Erinaceus europaeus
ENSEEUG00000000955
I
0.000
ZNF143
Felis catus
ENSFCAG00000002342
I
0.000
ZNF76
Felis catus
ENSFCAG00000005893
I
0.000
ENSFALG00000000985
Ficedula albicollis
ENSFALG00000000985
I
0.000
ENSFALG00000003698
Ficedula albicollis
ENSFALG00000003698
I
0.000
ENSGMOG00000001888
Gadus morhua
ENSGMOG00000001888
I
0.000
ZNF143
Gallus gallus
ENSGALG00000005787
I
0.000
znf143b
Gasterosteus aculeatus
ENSGACG00000009776
I
0.000
Gfo_R002960
Geospiza fortis
Gfo_R002960
I
0.000
Gfo_R011843
Geospiza fortis
Gfo_R011843
I
0.000
ZNF76
Gorilla gorilla
ENSGGOG00000014188
I
0.000
ZNF76
Homo sapiens
ENSG00000065029
D
0.000
ZNF143
Homo sapiens
ENSG00000166478
D
0.000
ENSSTOG00000000256
Ictidomys tridecemlineatus
ENSSTOG00000000256
I
0.000
ENSSTOG00000009647
Ictidomys tridecemlineatus
ENSSTOG00000009647
I
0.000
ENSLACG00000017669
Latimeria chalumnae
ENSLACG00000017669
I
0.000
ENSLOCG00000003619
Lepisosteus oculatus
ENSLOCG00000003619
I
0.000
ENSLOCG00000011655
Lepisosteus oculatus
ENSLOCG00000011655
I
0.000
LotgiG222832
Lottia gigantea
LotgiG222832
I
0.000
ZNF143
Loxodonta africana
ENSLAFG00000004487
I
0.000
ZNF76
Loxodonta africana
ENSLAFG00000026071
I
0.000
ENSP00000363064
Macaca fascicularis
ENSP00000363064
I
0.000
ENSP00000379847
Macaca fascicularis
ENSP00000379847
I
0.000
ZNF143
Macaca mulatta
ENSMMUG00000008758
I
0.000
ZNF76
Macaca mulatta
ENSMMUG00000023559
I
0.000
ENSMEUG00000003014
Macropus eugenii
ENSMEUG00000003014
I
0.000
ZNF143
Meleagris gallopavo
ENSMGAG00000006206
I
0.000
ZNF143
Microcebus murinus
ENSMICG00000004353
I
0.000
ZNF143
Monodelphis domestica
ENSMODG00000007909
I
0.000
ZNF76
Monodelphis domestica
ENSMODG00000013806
I
0.000
ENSMPUG00000003522
Mustela putorius furo
ENSMPUG00000003522
I
0.000
ENSMPUG00000012796
Mustela putorius furo
ENSMPUG00000012796
I
0.000
Zfp523
Mus musculus
ENSMUSG00000024220
I
0.000
Zfp143
Mus musculus
ENSMUSG00000061079
D
0.000
Myotis_brandtii_ZNF143_10021171
Myotis brandtii
Myotis_brandtii_ZNF143_10021171
I
0.000
Myotis_brandtii_ZNF76_10017771
Myotis brandtii
Myotis_brandtii_ZNF76_10017771
I
0.000
ZNF143
Myotis lucifugus
ENSMLUG00000000213
I
0.000
ZNF76
Myotis lucifugus
ENSMLUG00000008610
I
0.000
ZNF143
Ochotona princeps
ENSOPRG00000005466
I
0.000
ENSOPRG00000009136
Ochotona princeps
ENSOPRG00000009136
I
0.000
Ocbimv22038914m.g
Octopus bimaculoides
Ocbimv22038914m.g
I
0.000
Ogr18895
Ophisaurus gracilis
Ogr18895
I
0.000
ENSONIG00000015524
Oreochromis niloticus
ENSONIG00000015524
I
0.000
ZNF143
Ornithorhynchus anatinus
ENSOANG00000005853
I
0.000
ZNF143
Oryctolagus cuniculus
ENSOCUG00000005226
I
0.000
ZNF76
Oryctolagus cuniculus
ENSOCUG00000015630
I
0.000
znf143b
Oryzias latipes
ENSORLG00000001130
I
0.000
ZNF76
Otolemur garnettii
ENSOGAG00000002935
I
0.000
ZNF143
Otolemur garnettii
ENSOGAG00000011518
I
0.000
ENSOARG00000012477
Ovis aries
ENSOARG00000012477
I
0.000
ZNF143
Pan troglodytes
ENSPTRG00000003349
I
0.000
ZNF76
Pan troglodytes
ENSPTRG00000018080
I
0.000
ENSPANG00000002501
Papio anubis
ENSPANG00000002501
I
0.000
ENSPANG00000021154
Papio anubis
ENSPANG00000021154
I
0.000
ENSPSIG00000005652
Pelodiscus sinensis
ENSPSIG00000005652
I
0.000
ENSPSIG00000009683
Pelodiscus sinensis
ENSPSIG00000009683
I
0.000
ENSPFOG00000008911
Poecilia formosa
ENSPFOG00000008911
I
0.000
Pvit_03784
Pogona vitticeps
Pvit_03784
I
0.000
ENSPPYG00000016525
Pongo abelii
ENSPPYG00000016525
I
0.000
ZNF76
Pteropus vampyrus
ENSPVAG00000008041
I
0.000
Zfp523
Rattus norvegicus
ENSRNOG00000000501
I
0.000
Zfp143
Rattus norvegicus
ENSRNOG00000010087
I
0.000
Sakowv30036637m.g
Saccoglossus kowalevskii
Sakowv30036637m.g
I
0.000
Sakowv30044960m.g
Saccoglossus kowalevskii
Sakowv30044960m.g
I
0.000
ENSSHAG00000009934
Sarcophilus harrisii
ENSSHAG00000009934
I
0.000
ZNF143
Sorex araneus
ENSSARG00000007780
I
0.000
SMAR015659
Strigamia maritima
SMAR015659
I
0.000
ZNF76
Sus scrofa
ENSSSCG00000001537
I
0.000
ZNF76
Taeniopygia guttata
ENSTGUG00000001745
I
0.000
ENSTGUG00000008153
Taeniopygia guttata
ENSTGUG00000008153
I
0.000
znf143
Takifugu rubripes
ENSTRUG00000009324
I
0.000
ENSTSYG00000004324
Tarsius syrichta
ENSTSYG00000004324
I
0.000
znf143b
Tetraodon nigroviridis
ENSTNIG00000013739
I
0.000
ZNF76
Tursiops truncatus
ENSTTRG00000009380
I
0.000
ZNF143
Tursiops truncatus
ENSTTRG00000015353
I
0.000
Tal_R001092
Tyto alba
Tal_R001092
I
0.000
Tal_R002540
Tyto alba
Tal_R002540
I
0.000
AAH73068
Xenopus laevis
AAH73068
I
0.000
znf143.S
Xenopus laevis
XB-GENE-1012509
I
0.000
znf143
Xenopus tropicalis
XB-GENE-1012504
I
0.000
ENSXMAG00000005152
Xiphophorus maculatus
ENSXMAG00000005152
I
0.000