gw1.224.39.1 (Physcomitrella patens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gw1.224.39.1 T227616_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.844 0.719
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.844 0.719
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.831 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.224.39.1 Homeodomain 61 122

Links

Other Homeodomain family TFs
Other Physcomitrella patens TFs

345 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__2739__AT5G66770.1 Arabidopsis lyrata fgenesh2_kg.8__2739__AT5G66770.1 N 0.000
SCL7 Arabidopsis thaliana AT3G50650 N 0.000
SCL4 Arabidopsis thaliana AT5G66770 N 0.000
Bostr.0568s0096 Boechera stricta Bostr.0568s0096 N 0.000
Bostr.6864s0182 Boechera stricta Bostr.6864s0182 N 0.000
Bra012102 Brassica rapa Bra012102 N 0.000
Carubv10016973m.g Capsella rubella Carubv10016973m.g N 0.000
Carubv10017026m.g Capsella rubella Carubv10017026m.g N 0.000
Thhalv10003860m.g Eutrema salsugineum Thhalv10003860m.g N 0.000
Thhalv10011122m.g Eutrema salsugineum Thhalv10011122m.g N 0.000