Eucgr.C00114 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.C00114 T228450_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.645 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00114.1 Homeodomain 2 58
Eucgr.C00114.2 Homeodomain 2 58

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.108__1__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.108__1__AT2G40200.1 I
Bra000177 Brassica rapa Bra000177 I
PK01630.1 Cannabis sativa PK01630.1 D
evm.TU.supercontig_19.156 Carica papaya evm.TU.supercontig_19.156 I
Ca_13402 Cicer arietinum Ca_13402 I
Cla006707 Citrullus lanatus Cla006707 I
Ciclev10032356m.g Citrus clementina Ciclev10032356m.g I
orange1.1g023629m.g Citrus sinensis orange1.1g023629m.g I
Cucsa.136730 Cucumis sativus Cucsa.136730 I
Eucgr.J00190 Eucalyptus grandis Eucgr.J00190 I
gene21000-v1.0-hybrid Fragaria vesca gene21000-v1.0-hybrid I
GLYMA18G02940 Glycine max GLYMA18G02940 I
GLYMA02G42570 Glycine max GLYMA02G42570 I
Gorai.012G078100 Gossypium raimondii Gorai.012G078100 I
Gorai.011G292100 Gossypium raimondii Gorai.011G292100 I
Lus10007502.g Linum usitatissimum Lus10007502.g I
Lus10028978.g Linum usitatissimum Lus10028978.g I
chr2.CM0002.120.nc Lotus japonicus chr2.CM0002.120.nc I
cassava37862.valid.m1 Manihot esculenta cassava37862.valid.m1 I
MTR_3g070970 Medicago truncatula MTR_3g070970 I
POPTR_0010s19400 Populus trichocarpa POPTR_0010s19400 I
POPTR_0008s07090 Populus trichocarpa POPTR_0008s07090 I
Pm018950 Prunus mume Pm018950 I
PRUPE_ppa010134mg Prunus persica PRUPE_ppa010134mg I
29814.m000735 Ricinus communis 29814.m000735 I
SapurV1A.0061s0470 Salix purpurea SapurV1A.0061s0470 I
Solyc03g095980.2 Solanum lycopersicum Solyc03g095980.2 I
PGSC0003DMG400027725 Solanum tuberosum PGSC0003DMG400027725 I
PGSC0003DMG400015659 Solanum tuberosum PGSC0003DMG400015659 I
TCM_042475 Theobroma cacao TCM_042475 I
VIT_13s0067g01350 Vitis vinifera VIT_13s0067g01350 I