AFUN008977 (Anopheles funestus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AFUN008977 T231854_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.982
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.982
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.982
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.982
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.965
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.965
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.965
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.965
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.965
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.965
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.965
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.965
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.965
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.965
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.965
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.947
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN008977-PA Homeodomain 159 215

Links

Other Homeodomain family TFs
Other Anopheles funestus TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31774 Aegilops tauschii F775_31774 I
F775_32183 Aegilops tauschii F775_32183 I
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I
AtbZIP52 Arabidopsis thaliana AT1G06850 D
BZIP18 Arabidopsis thaliana AT2G40620 D
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I
Bo4g012700 Brassica oleracea Bo4g012700 I
Bo4g190320 Brassica oleracea Bo4g190320 I
Bo8g007220 Brassica oleracea Bo8g007220 I
Bo8g114410 Brassica oleracea Bo8g114410 I
Bra004582 Brassica rapa Bra004582 I
Bra016980 Brassica rapa Bra016980 I
Bra030663 Brassica rapa Bra030663 I
Bra031541 Brassica rapa Bra031541 I
PK00315.1 Cannabis sativa PK00315.1 D
PK16335.1 Cannabis sativa PK16335.1 D
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I
Carubv10009673m.g Capsella rubella Carubv10009673m.g I
Carubv10025182m.g Capsella rubella Carubv10025182m.g I
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I
Ca_04108 Cicer arietinum Ca_04108 I
Ca_08929 Cicer arietinum Ca_08929 I
Ca_15657 Cicer arietinum Ca_15657 I
Cla007409 Citrullus lanatus Cla007409 I
Cla013626 Citrullus lanatus Cla013626 I
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I
Cucsa.118900 Cucumis sativus Cucsa.118900 I
Cucsa.143950 Cucumis sativus Cucsa.143950 I
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I
GLYMA02G40270 Glycine max GLYMA02G40270 I
GLYMA11G30940 Glycine max GLYMA11G30940 I
GLYMA14G38460 Glycine max GLYMA14G38460 I
GLYMA18G05880 Glycine max GLYMA18G05880 I
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I
MLOC_44311 Hordeum vulgare MLOC_44311 I
MLOC_51623 Hordeum vulgare MLOC_51623 I
MLOC_60045 Hordeum vulgare MLOC_60045 I
LPERR03G14390 Leersia perrieri LPERR03G14390 I
LPERR07G23230 Leersia perrieri LPERR07G23230 I
Lus10008605.g Linum usitatissimum Lus10008605.g I
Lus10009907.g Linum usitatissimum Lus10009907.g I
Lus10012881.g Linum usitatissimum Lus10012881.g I
Lus10030531.g Linum usitatissimum Lus10030531.g I
Lus10042211.g Linum usitatissimum Lus10042211.g I
LjSGA_023972.1 Lotus japonicus LjSGA_023972.1 I
MDP0000129203 Malus domestica MDP0000129203 I
MDP0000210251 Malus domestica MDP0000210251 I
MDP0000247372 Malus domestica MDP0000247372 I
MDP0000297791 Malus domestica MDP0000297791 I
MDP0000305387 Malus domestica MDP0000305387 I
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I
MTR_3g094020 Medicago truncatula MTR_3g094020 I
MTR_3g467120 Medicago truncatula MTR_3g467120 I
MTR_5g075390 Medicago truncatula MTR_5g075390 I
mgf007830m Mimulus guttatus mgf007830m I
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I
GSMUA_Achr5G29650_001 Musa acuminata GSMUA_Achr5G29650_001 I
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I
OBART03G16510 Oryza barthii OBART03G16510 I
OBART07G26390 Oryza barthii OBART07G26390 I
OB03G26210 Oryza brachyantha OB03G26210 I
OB07G31840 Oryza brachyantha OB07G31840 I
ORGLA03G0157900 Oryza glaberrima ORGLA03G0157900 I
ORGLA07G0207300 Oryza glaberrima ORGLA07G0207300 I
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I
BGIOSGA012577 Oryza indica BGIOSGA012577 I
OLONG_008214 Oryza longistaminata OLONG_008214 I
OLONG_019327 Oryza longistaminata OLONG_019327 I
OMERI03G14760 Oryza meridionalis OMERI03G14760 I
OMERI07G23010 Oryza meridionalis OMERI07G23010 I
ONIVA03G17500 Oryza nivara ONIVA03G17500 I
ONIVA07G26100 Oryza nivara ONIVA07G26100 I
OPUNC03G15960 Oryza punctata OPUNC03G15960 I
OPUNC07G24840 Oryza punctata OPUNC07G24840 I
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I
RF2B Oryza sativa OS03G0336200 I
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I
Pavir.J07252 Panicum virgatum Pavir.J07252 I
PDK_20s1367981g001 Phoenix dactylifera PDK_20s1367981g001 I
PDK_20s1563121g001 Phoenix dactylifera PDK_20s1563121g001 I
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I
Pm000251 Prunus mume Pm000251 I
Pm019060 Prunus mume Pm019060 I
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I
29729.m002363 Ricinus communis 29729.m002363 I
29804.m001495 Ricinus communis 29804.m001495 I
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I
Si030224m.g Setaria italica Si030224m.g I
Si036380m.g Setaria italica Si036380m.g I
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I
TCM_042286 Theobroma cacao TCM_042286 I
TCM_045524 Theobroma cacao TCM_045524 I
Traes_2AS_3B7BE6FDC Triticum aestivum Traes_2AS_3B7BE6FDC I
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I
GRMZM2G062391 Zea mays GRMZM2G062391 I
GRMZM2G151295 Zea mays GRMZM2G151295 I