L596_g12541 (Steinernema carpocapsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 L596_g12541 T234490_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PBX2
M08134_2.00
Homo sapiens
NWGAKTGACABN

NVTGTCAMTCWN
ChIP-seq
Mathelier et al.(2014)
MA1113.1
0.777 0.719
PBX2
M09165_2.00
Homo sapiens
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C
0.777 0.719
Pbx2
M09199_2.00
Mus musculus
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C
0.777 0.719
pbx4
M02110_2.00
Tetraodon nigroviridis
TTGAYGDV

BHCRTCAA
PBM
Weirauch et al.(2014)
pTH6425
0.777 0.702
Pbx3
M09205_2.00
Mus musculus
BBBTGATTGRYNDN

NHNRYCAATCAVVV
Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A
0.777 0.702
Pbx1
M00513_2.00
Mus musculus
NNDKANNNN

NNNNTMHNN
PBM
Berger et al.(2008)
Pbx1_3203
0.777 0.684
PBX1
M05362_2.00
Homo sapiens
NTGATKGAYR

YRTCMATCAN
SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX
0.777 0.684
PBX1
M05364_2.00
Homo sapiens
DTGMTKGRYN

NRYCMAKCAH
SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX
0.777 0.684
PBX1
M02685_2.00
Homo sapiens
WWTGATTGATND

HNATCAATCAWW
SELEX
Mathelier et al.(2014)
MA0070.1
0.777 0.684
PBX1
M09164_2.00
Homo sapiens
DGABTGRCRG

CYGYCAVTCH
Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A
0.777 0.684
PBX1
M09561_2.00
Homo sapiens
TGABTGACAGSC

GSCTGTCAVTCA
Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007
0.777 0.684
PBX1
M10748_2.00
Homo sapiens
WTKATTRDT

AHYAATMAW
Transfac
Matys et al.(2006)
V$PBX1_01
0.777 0.684
PBX1
M10749_2.00
Homo sapiens
DNHTTGATTGATKDB

VHMATCAATCAADNH
Transfac
Matys et al.(2006)
V$PBX1_02
0.777 0.684
PBX1
M10750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_03
0.777 0.684
PBX1
M10751_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_05
0.777 0.684
PBX1
M10752_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_10
0.777 0.684
PBX1
M10753_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_Q3
0.777 0.684
PBX1
M05363_2.00
Homo sapiens
DTGAKKGAYG

CRTCMMTCAH
SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX
0.777 0.684
PBX1
M05365_2.00
Homo sapiens
MRTCAATCMH

DKGATTGAYK
SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX
0.777 0.684
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.732 0.684
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.732 0.684
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA

TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.732 0.684
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW

WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.732 0.684
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR

YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.732 0.684
PBX4
M00277_2.00
Homo sapiens
NNDDWHDNNN

NNNHDWHHNN
PBM
Barrera et al.(2016)
PBX4_REF
0.730 0.667
PBX4
M10649_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX4_01
0.730 0.667
CBG10835
M01243_2.00
Caenorhabditis briggsae
NNTKAYDNN

NNHRTMANN
PBM
Lambert et al.(2019)
pTH11444
0.658 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g12541.t1 Homeodomain 202 261

Links

Other Homeodomain family TFs
Other Steinernema carpocapsae TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I
AAEL003436 Aedes aegypti AAEL003436 I
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I
EBF3 Anolis carolinensis ENSACAG00000008590 I
AALB010330 Anopheles albimanus AALB010330 I
ACOM041538 Anopheles coluzzii ACOM041538 I
ACUA010350 Anopheles culicifacies ACUA010350 I
AGAP011437 Anopheles gambiae AGAP011437 I
AMEM016790 Anopheles merus AMEM016790 I
ASTEI06455 Anopheles stephensi ASTEI06455 I
GB42304 Apis mellifera GB42304 I
Afo_R002906 Aptenodytes forsteri Afo_R002906 I
Afo_R003215 Aptenodytes forsteri Afo_R003215 I
ASU_01180 Ascaris suum ASU_01180 I
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I
EBF1 Bos taurus ENSBTAG00000037508 I
EBF4 Bos taurus ENSBTAG00000037757 I
EBF2 Bos taurus ENSBTAG00000040390 I
Bm6296 Brugia malayi Bm6296 I
BTMF_0000130101 Brugia timori BTMF_0000130101 I
Brh_R003197 Buceros rhinoceros Brh_R003197 I
unc-3 Caenorhabditis elegans WBGene00006743 I
EBF3 Callithrix jacchus ENSCJAG00000014357 I
EBF1 Callithrix jacchus ENSCJAG00000019016 I
EBF2 Callithrix jacchus ENSCJAG00000019921 I
EBF4 Callithrix jacchus ENSCJAG00000021027 I
Aan_R007097 Calypte anna Aan_R007097 I
Aan_R009520 Calypte anna Aan_R009520 I
EBF4 Canis familiaris ENSCAFG00000006631 I
EBF2 Canis familiaris ENSCAFG00000008918 I
EBF1 Canis familiaris ENSCAFG00000017318 I
CapteG93575 Capitella teleta CapteG93575 I
EBF2 Cavia porcellus ENSCPOG00000001463 I
EBF4 Cavia porcellus ENSCPOG00000004862 I
EBF3 Cavia porcellus ENSCPOG00000005096 I
EBF1 Cavia porcellus ENSCPOG00000026184 I
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I
CGI_10023990 Crassostrea gigas CGI_10023990 I
KGM_09934 Danaus plexippus KGM_09934 I
ebf2 Danio rerio ENSDARG00000042525 I
ebf1b Danio rerio ENSDARG00000069196 I
ebf3b Danio rerio ENSDARG00000091287 I
ebf1a Danio rerio ENSDARG00000099849 I
ebf3a Danio rerio ENSDARG00000100244 I
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I
DME_0000265301 Dracunculus medinensis DME_0000265301 I
GF11778 Drosophila ananassae FBgn0088818 I
GG22397 Drosophila erecta FBgn0114569 I
GH12956 Drosophila grimshawi FBgn0120434 I
GH20479 Drosophila grimshawi FBgn0127942 I
GH25280 Drosophila grimshawi FBgn0132735 I
kn Drosophila melanogaster FBgn0001319 D
GI21022 Drosophila mojavensis FBgn0143754 I
GL10656 Drosophila persimilis FBgn0148266 I
GA24435 Drosophila pseudoobscura FBgn0245832 I
GM20182 Drosophila sechellia FBgn0175065 I
GJ21945 Drosophila virilis FBgn0209060 I
GK23295 Drosophila willistoni FBgn0225257 I
GE12286 Drosophila yakuba FBgn0230042 I
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I
EBF1 Echinops telfairi ENSETEG00000011711 I
EBF3 Echinops telfairi ENSETEG00000014060 I
EBF1 Equus caballus ENSECAG00000007964 I
EBF4 Equus caballus ENSECAG00000010003 I
EBF2 Equus caballus ENSECAG00000014179 I
EBF2 Felis catus ENSFCAG00000003607 I
EBF1 Felis catus ENSFCAG00000008547 I
EBF4 Felis catus ENSFCAG00000014453 I
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I
ENSGMOG00000010328 Gadus morhua ENSGMOG00000010328 I
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I
EBF2 Gallus gallus ENSGALG00000000242 I
EBF1 Gallus gallus ENSGALG00000003699 I
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I
Gfo_R004859 Geospiza fortis Gfo_R004859 I
EBF1 Gorilla gorilla ENSGGOG00000000033 I
EBF2 Gorilla gorilla ENSGGOG00000001585 I
EBF4 Gorilla gorilla ENSGGOG00000015503 I
HelroG112029 Helobdella robusta HelroG112029 I
EBF4 Homo sapiens ENSG00000088881 D
EBF3 Homo sapiens ENSG00000108001 D
EBF1 Homo sapiens ENSG00000164330 D
EBF2 Homo sapiens ENSG00000221818 D
HDID_0000285701 Hymenolepis diminuta HDID_0000285701 I
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I
LOAG_18199 Loa loa LOAG_18199 I
LotgiG225788 Lottia gigantea LotgiG225788 I
EBF1 Loxodonta africana ENSLAFG00000017522 I
EBF2 Loxodonta africana ENSLAFG00000022465 I
LCUP013861 Lucilia cuprina LCUP013861 I
ENSP00000347463 Macaca fascicularis ENSP00000347463 I
ENSP00000405003 Macaca fascicularis ENSP00000405003 I
EBF3 Macaca mulatta ENSMMUG00000011447 I
EBF4 Macaca mulatta ENSMMUG00000021331 I
EBF2 Meleagris gallopavo ENSMGAG00000000791 I
EBF1 Meleagris gallopavo ENSMGAG00000004896 I
MCINX016126 Melitaea cinxia MCINX016126 I
EBF3 Microcebus murinus ENSMICG00000008536 I
EBF1 Microcebus murinus ENSMICG00000010036 I
EBF4 Monodelphis domestica ENSMODG00000005256 I
EBF1 Monodelphis domestica ENSMODG00000008198 I
EBF2 Monodelphis domestica ENSMODG00000016702 I
MDOA011385 Musca domestica MDOA011385 I
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I
Ebf3 Mus musculus ENSMUSG00000010476 I
Ebf2 Mus musculus ENSMUSG00000022053 D
Ebf4 Mus musculus ENSMUSG00000053552 D
Ebf1 Mus musculus ENSMUSG00000057098 D
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I
EBF2 Myotis lucifugus ENSMLUG00000011509 I
EBF4 Myotis lucifugus ENSMLUG00000023832 I
NV10306 Nasonia vitripennis NV10306 I
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I
EBF4 Ochotona princeps ENSOPRG00000013703 I
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I
WBGene00240610 Onchocerca volvulus WBGene00240610 I
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I
EBF1 Oryzias latipes ENSORLG00000002342 I
ebf3a Oryzias latipes ENSORLG00000005870 I
ebf2 Oryzias latipes ENSORLG00000006408 I
EBF1 Oryzias latipes ENSORLG00000007471 I
EBF4 Oryzias latipes ENSORLG00000020414 I
EBF4 Otolemur garnettii ENSOGAG00000004688 I
EBF3 Otolemur garnettii ENSOGAG00000007572 I
EBF2 Otolemur garnettii ENSOGAG00000010783 I
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I
EBF2 Pan troglodytes ENSPTRG00000003058 I
EBF1 Pan troglodytes ENSPTRG00000017477 I
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I
PHUM119360 Pediculus humanus PHUM119360 I
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I
Pvit_12046 Pogona vitticeps Pvit_12046 I
Pvit_16838 Pogona vitticeps Pvit_16838 I
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I
EBF4 Procavia capensis ENSPCAG00000011947 I
EBF1 Procavia capensis ENSPCAG00000013495 I
EBF4 Pteropus vampyrus ENSPVAG00000006830 I
EBF2 Pteropus vampyrus ENSPVAG00000024254 I
Ebf4 Rattus norvegicus ENSRNOG00000007408 I
Ebf2 Rattus norvegicus ENSRNOG00000011548 I
Ebf3 Rattus norvegicus ENSRNOG00000016102 I
Ebf1 Rattus norvegicus ENSRNOG00000028845 I
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I
SMU15024001 Schmidtea mediterranea SMU15024001 I
L596_g20342 Steinernema carpocapsae L596_g20342 I
L889_g1820 Steinernema feltiae L889_g1820 I
L893_g31120 Steinernema glaseri L893_g31120 I
L898_g8304 Steinernema monticolum L898_g8304 I
SMAR000842 Strigamia maritima SMAR000842 I
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I
EBF4 Sus scrofa ENSSSCG00000007171 I
EBF2 Sus scrofa ENSSSCG00000009655 I
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I
EBF1 Taeniopygia guttata ENSTGUG00000000593 I
EBF2 Taeniopygia guttata ENSTGUG00000004267 I
EBF3 Taeniopygia guttata ENSTGUG00000011600 I
ebf3a Takifugu rubripes ENSTRUG00000005721 I
EBF1 Takifugu rubripes ENSTRUG00000009320 I
ebf2 Takifugu rubripes ENSTRUG00000011528 I
EBF1 Takifugu rubripes ENSTRUG00000013805 I
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I
TC001270 Tribolium castaneum TC001270 I
D917_06660 Trichinella nativa D917_06660 I
EFV50386 Trichinella spiralis EFV50386 I
D918_06798 Trichuris suis D918_06798 I
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I
EBF3 Tupaia belangeri ENSTBEG00000005858 I
EBF4 Tursiops truncatus ENSTTRG00000003459 I
EBF1 Tursiops truncatus ENSTTRG00000009929 I
EBF3 Tursiops truncatus ENSTTRG00000014010 I
WUBG_00630 Wuchereria bancrofti WUBG_00630 I
ebf2.L Xenopus laevis XB-GENE-6252857 I
ebf3.L Xenopus laevis XB-GENE-962547 I
ebf2.S Xenopus laevis XB-GENE-971141 I
ebf4 Xenopus tropicalis XB-GENE-6030626 I
ebf3 Xenopus tropicalis XB-GENE-962543 I
ebf2 Xenopus tropicalis XB-GENE-971136 I
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I
L798_15574 Zootermopsis nevadensis L798_15574 I