ENSLACG00000022562 (Latimeria chalumnae)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 ENSLACG00000022562 T240257_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.326 0.675
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.319 0.651
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.319 0.651
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.319 0.651
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.319 0.651
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.319 0.651
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.319 0.651
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.319 0.651
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.319 0.651
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.319 0.651
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.319 0.651
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000022623 HSF 30 115

Links

Other HSF family TFs
Other Latimeria chalumnae TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I
MYB113 Arabidopsis thaliana AT1G66370 D
MYB75 Arabidopsis thaliana AT1G56650 I
MYB90 Arabidopsis thaliana AT1G66390 I
MYB114 Arabidopsis thaliana AT1G66380 I
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I
Bo6g100940 Brassica oleracea Bo6g100940 I
Bo6g099880 Brassica oleracea Bo6g099880 I
Bo00835s060 Brassica oleracea Bo00835s060 I
Bra004162 Brassica rapa Bra004162 I
Bra039763 Brassica rapa Bra039763 I
Bra001917 Brassica rapa Bra001917 I
PK05760.1 Cannabis sativa PK05760.1 I
PK17827.1 Cannabis sativa PK17827.1 I
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I
Carubv10020856m.g Capsella rubella Carubv10020856m.g I
Carubv10020888m.g Capsella rubella Carubv10020888m.g I
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I
GLYMA09G36966 Glycine max GLYMA09G36966 I
GLYMA19G02980 Glycine max GLYMA19G02980 I
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I
Lus10042522.g Linum usitatissimum Lus10042522.g I
Lus10028514.g Linum usitatissimum Lus10028514.g I
Lus10028513.g Linum usitatissimum Lus10028513.g I
Lus10009130.g Linum usitatissimum Lus10009130.g I
Lus10009129.g Linum usitatissimum Lus10009129.g I
MTR_5g078950 Medicago truncatula MTR_5g078950 I
MTR_5g079290 Medicago truncatula MTR_5g079290 I
MTR_8g060940 Medicago truncatula MTR_8g060940 I
MTR_5g079220 Medicago truncatula MTR_5g079220 I
MTR_5g078860 Medicago truncatula MTR_5g078860 I
MTR_5g078800 Medicago truncatula MTR_5g078800 I
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I
mgf019317m Mimulus guttatus mgf019317m I
mgf022565m Mimulus guttatus mgf022565m I
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I
Pm029442 Prunus mume Pm029442 I
Pm029445 Prunus mume Pm029445 I
Pm029440 Prunus mume Pm029440 I
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I
30128.m008730 Ricinus communis 30128.m008730 I
27763.m000042 Ricinus communis 27763.m000042 I
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I
TCM_019192 Theobroma cacao TCM_019192 I
TCM_026054 Theobroma cacao TCM_026054 I
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I