Bostr.26833s0037 (Boechera stricta)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Bostr.26833s0037 T242991_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.554 0.966
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.554 0.966
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.457 0.828
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.457 0.828
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.444 0.655
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.444 0.655
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.425 0.713
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.415 0.690
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.415 0.690
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.408 0.655
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.408 0.655
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.405 0.644
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.405 0.644
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.392 0.655
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.392 0.655
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.389 0.609
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.389 0.609
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.389 0.609
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.381 0.609
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.321 0.540
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.321 0.540
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.321 0.540
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.321 0.540
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.321 0.540
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.321 0.540
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.321 0.540
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.321 0.540
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.321 0.540
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.321 0.540
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.321 0.540
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26833s0037.1.p HSF 24 114

Links

Other HSF family TFs
Other Boechera stricta TFs

1480 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14780 Aegilops tauschii F775_14780 I
F775_15875 Aegilops tauschii F775_15875 I
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I
AMTR_s00096p00160080 Amborella trichopoda AMTR_s00096p00160080 I
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I
SCRM2 Arabidopsis lyrata Al_scaffold_0001_1326 I
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I
SCRM2 Arabidopsis thaliana AT1G12860 I
SCRM Arabidopsis thaliana AT3G26744 D
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I
Bo00285s440 Brassica oleracea Bo00285s440 I
Bo01390s040 Brassica oleracea Bo01390s040 I
Bo5g016490 Brassica oleracea Bo5g016490 I
Bo5g016510 Brassica oleracea Bo5g016510 I
Bo7g083870 Brassica oleracea Bo7g083870 I
Bo8g065080 Brassica oleracea Bo8g065080 I
Bo9g008020 Brassica oleracea Bo9g008020 I
Bra016749 Brassica rapa Bra016749 I
Bra019794 Brassica rapa Bra019794 I
Bra025226 Brassica rapa Bra025226 I
Bra032947 Brassica rapa Bra032947 I
Bra034246 Brassica rapa Bra034246 I
PK03241.1 Cannabis sativa PK03241.1 I
PK06841.1 Cannabis sativa PK06841.1 I
PK06940.1 Cannabis sativa PK06940.1 I
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I
Carubv10009081m.g Capsella rubella Carubv10009081m.g I
Carubv10017099m.g Capsella rubella Carubv10017099m.g I
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I
Ca_01394 Cicer arietinum Ca_01394 I
Ca_23892 Cicer arietinum Ca_23892 I
Cla002682 Citrullus lanatus Cla002682 I
Cla003283 Citrullus lanatus Cla003283 I
Cla016068 Citrullus lanatus Cla016068 I
Cla023112 Citrullus lanatus Cla023112 I
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I
Ciclev10033428m.g Citrus clementina Ciclev10033428m.g I
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I
orange1.1g041101m.g Citrus sinensis orange1.1g041101m.g I
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I
Cucsa.010660 Cucumis sativus Cucsa.010660 I
Cucsa.088960 Cucumis sativus Cucsa.088960 I
Cucsa.134750 Cucumis sativus Cucsa.134750 I
Cucsa.156040 Cucumis sativus Cucsa.156040 I
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I
GLYMA04G37750 Glycine max GLYMA04G37750 I
GLYMA05G38530 Glycine max GLYMA05G38530 I
GLYMA06G17330 Glycine max GLYMA06G17330 I
GLYMA13G00480 Glycine max GLYMA13G00480 I
GLYMA16G05390 Glycine max GLYMA16G05390 I
GLYMA16G26291 Glycine max GLYMA16G26291 I
GLYMA17G06610 Glycine max GLYMA17G06610 I
GLYMA19G27483 Glycine max GLYMA19G27483 I
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I
Gorai.008G036900 Gossypium raimondii Gorai.008G036900 I
MLOC_46407 Hordeum vulgare MLOC_46407 I
MLOC_52192 Hordeum vulgare MLOC_52192 I
MLOC_56814 Hordeum vulgare MLOC_56814 I
MLOC_76805 Hordeum vulgare MLOC_76805 I
LPERR01G37160 Leersia perrieri LPERR01G37160 I
LPERR11G11940 Leersia perrieri LPERR11G11940 I
Lus10030609.g Linum usitatissimum Lus10030609.g N
Lus10032542.g Linum usitatissimum Lus10032542.g I
Lus10043199.g Linum usitatissimum Lus10043199.g I
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I
MDP0000219146 Malus domestica MDP0000219146 I
MDP0000247912 Malus domestica MDP0000247912 I
MDP0000304669 Malus domestica MDP0000304669 I
MDP0000662999 Malus domestica MDP0000662999 I
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I
cassava7475.valid.m1 Manihot esculenta cassava7475.valid.m1 I
MTR_3g498695 Medicago truncatula MTR_3g498695 I
MTR_7g083900 Medicago truncatula MTR_7g083900 I
mgf012194m Mimulus guttatus mgf012194m I
mgf015974m Mimulus guttatus mgf015974m I
mgf016462m Mimulus guttatus mgf016462m I
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I
OBART01G42600 Oryza barthii OBART01G42600 I
OBART11G15260 Oryza barthii OBART11G15260 I
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I
BGIOSGA000206 Oryza indica BGIOSGA000206 I
BGIOSGA035358 Oryza indica BGIOSGA035358 I
OMERI01G39590 Oryza meridionalis OMERI01G39590 I
OMERI11G12580 Oryza meridionalis OMERI11G12580 I
ONIVA01G48650 Oryza nivara ONIVA01G48650 I
ONIVA12G10770 Oryza nivara ONIVA12G10770 I
OPUNC01G41620 Oryza punctata OPUNC01G41620 I
OPUNC11G12640 Oryza punctata OPUNC11G12640 I
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I
OS01G0928000 Oryza sativa OS01G0928000 I
OS11G0523700 Oryza sativa OS11G0523700 I
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I
Pm008898 Prunus mume Pm008898 I
Pm016093 Prunus mume Pm016093 I
Pm024587 Prunus mume Pm024587 I
PRUPE_ppa002978mg Prunus persica PRUPE_ppa002978mg I
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I
30131.m006993 Ricinus communis 30131.m006993 I
30147.m014419 Ricinus communis 30147.m014419 I
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I
Si001874m.g Setaria italica Si001874m.g I
Si006500m.g Setaria italica Si006500m.g I
Si026212m.g Setaria italica Si026212m.g I
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I
Solyc08g062780.1 Solanum lycopersicum Solyc08g062780.1 I
PGSC0003DMG400008195 Solanum tuberosum PGSC0003DMG400008195 I
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I
Sb03g044660 Sorghum bicolor Sb03g044660 I
Sb04g001650 Sorghum bicolor Sb04g001650 I
Sb05g019530 Sorghum bicolor Sb05g019530 I
TCM_006602 Theobroma cacao TCM_006602 I
TCM_014741 Theobroma cacao TCM_014741 I
TCM_017336 Theobroma cacao TCM_017336 I
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I
Traes_4DS_7B0E8D459 Triticum aestivum Traes_4DS_7B0E8D459 I
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I
TRIUR3_16046 Triticum urartu TRIUR3_16046 I
TRIUR3_17003 Triticum urartu TRIUR3_17003 I
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I
GRMZM2G033356 Zea mays GRMZM2G033356 I
GRMZM2G172297 Zea mays GRMZM2G172297 I
GRMZM2G173534 Zea mays GRMZM2G173534 I