ASIL1 (Arabidopsis thaliana)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 AT1G54060 T247878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL1
M02264_2.00		 Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02264_2.00 MADF 67 141

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G54060.1 MADF 107 181

Links

Other MADF family TFs
Other Arabidopsis thaliana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.859
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.962
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.871
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.962
Bo6g033010 Brassica oleracea Bo6g033010 I 0.935
Bo6g050870 Brassica oleracea Bo6g050870 I 0.939
Bo3g184450 Brassica oleracea Bo3g184450 I 0.935
Bra014370 Brassica rapa Bra014370 I 0.950
Bra037960 Brassica rapa Bra037960 I 0.935
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.957
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.863
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.843
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.957
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.952
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.818
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.813
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.818
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.819
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.821