Al_scaffold_0007_3741 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Al_scaffold_0007_3741 T252789_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0007_3741 MADS box 12 58

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I
AAEL011231 Aedes aegypti AAEL011231 I
AALB007603 Anopheles albimanus AALB007603 I
AARA005929 Anopheles arabiensis AARA005929 I
AATE013762 Anopheles atroparvus AATE013762 I
ACUA011505 Anopheles culicifacies ACUA011505 I
ADIR005732 Anopheles dirus ADIR005732 I
AEPI004043 Anopheles epiroticus AEPI004043 I
AFAF014433 Anopheles farauti AFAF014433 I
AFUN003486 Anopheles funestus AFUN003486 I
AGAP028221 Anopheles gambiae AGAP028221 I
AGAP010438 Anopheles gambiae AGAP010438 D
AMEM014965 Anopheles merus AMEM014965 I
AMIN004996 Anopheles minimus AMIN004996 I
AQUA005997 Anopheles quadriannulatus AQUA005997 I
ASIS019127 Anopheles sinensis ASIS019127 I
GB52331 Apis mellifera GB52331 I
GB51231 Apis mellifera GB51231 I
GB48727 Apis mellifera GB48727 I
ACEP12797 Atta cephalotes ACEP12797 I
ACEP13260 Atta cephalotes ACEP13260 I
Cflo_03607--XP_395932.2_APIME Camponotus floridanus Cflo_03607--XP_395932.2_APIME I
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I
CLEC025065 Cimex lectularius CLEC025065 I
CLEC007515 Cimex lectularius CLEC007515 I
KGM_21348 Danaus plexippus KGM_21348 I
KGM_10290 Danaus plexippus KGM_10290 I
DAPPUDRAFT_290668 Daphnia pulex DAPPUDRAFT_290668 I
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I
GF24121 Drosophila ananassae FBgn0101115 I
GF24122 Drosophila ananassae FBgn0101116 I
GF25170 Drosophila ananassae FBgn0102162 I
GG13294 Drosophila erecta FBgn0105566 I
GG13292 Drosophila erecta FBgn0105564 I
GG16225 Drosophila erecta FBgn0108460 I
GH16373 Drosophila grimshawi FBgn0123844 I
GH16981 Drosophila grimshawi FBgn0124452 I
GH16982 Drosophila grimshawi FBgn0124453 I
knrl Drosophila melanogaster FBgn0001323 D
kni Drosophila melanogaster FBgn0001320 D
eg Drosophila melanogaster FBgn0000560 D
GI11566 Drosophila mojavensis FBgn0134326 I
GI11896 Drosophila mojavensis FBgn0134654 I
GI11900 Drosophila mojavensis FBgn0134658 I
GL24862 Drosophila persimilis FBgn0162450 I
GL12762 Drosophila persimilis FBgn0150368 I
GL12764 Drosophila persimilis FBgn0150370 I
GA20312 Drosophila pseudoobscura FBgn0080307 I
GA18413 Drosophila pseudoobscura FBgn0078415 I
GA18381 Drosophila pseudoobscura FBgn0078384 I
GM22199 Drosophila sechellia FBgn0177069 I
kni Drosophila sechellia FBgn0044208 I
GD15001 Drosophila simulans FBgn0186673 I
GD12173 Drosophila simulans FBgn0183909 I
kni Drosophila simulans FBgn0044187 I
GJ11245 Drosophila virilis FBgn0198506 I
kni Drosophila virilis FBgn0013118 I
GJ13774 Drosophila virilis FBgn0200993 I
GK17344 Drosophila willistoni FBgn0219343 I
GK10545 Drosophila willistoni FBgn0212560 I
GK10566 Drosophila willistoni FBgn0212581 I
GE23274 Drosophila yakuba FBgn0240471 I
GE22389 Drosophila yakuba FBgn0239612 I
GE19793 Drosophila yakuba FBgn0237126 I
HHAL001315-PA Halyomorpha halys HHAL001315-PA I
Hsal_02927--XP_395932.2_APIME Harpegnathos saltator Hsal_02927--XP_395932.2_APIME I
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I
HMEL010451 Heliconius melpomene HMEL010451 I
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I
LDEC003050 Leptinotarsa decemlineata LDEC003050 I
LCUP004922 Lucilia cuprina LCUP004922 I
LCUP004920 Lucilia cuprina LCUP004920 I
LCUP004919 Lucilia cuprina LCUP004919 I
MDOA002495 Musca domestica MDOA002495 I
MDOA008593 Musca domestica MDOA008593 I
MDOA012160 Musca domestica MDOA012160 I
NV16468 Nasonia vitripennis NV16468 I
PHUM470190 Pediculus humanus PHUM470190 I
PHUM468660 Pediculus humanus PHUM468660 I
PPAI002202 Phlebotomus papatasi PPAI002202 I
RPRC003216 Rhodnius prolixus RPRC003216 I
nRc.2.0.1.g43935 Romanomermis culicivorax nRc.2.0.1.g43935 I
SINV19531 Solenopsis invicta SINV19531 I
SINV19432 Solenopsis invicta SINV19432 I
SMAR012614 Strigamia maritima SMAR012614 I
tetur34g00430 Tetranychus urticae tetur34g00430 I
TC003413 Tribolium castaneum TC003413 I
TC003409 Tribolium castaneum TC003409 I
L798_11128 Zootermopsis nevadensis L798_11128 I