CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g021400
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo3g021400
T253089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g021400.1
MADS box
10
54
RIMNEKTRITTYRKRKECLFKKANEFSTLCGVNTCLIVYGPTRAG
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.5__1404__AT3G50650.1
Arabidopsis lyrata
fgenesh2_kg.5__1404__AT3G50650.1
N
fgenesh2_kg.8__2739__AT5G66770.1
Arabidopsis lyrata
fgenesh2_kg.8__2739__AT5G66770.1
N
SCL7
Arabidopsis thaliana
AT3G50650
N
SCL4
Arabidopsis thaliana
AT5G66770
N
Bostr.0568s0096
Boechera stricta
Bostr.0568s0096
N
Bostr.6864s0182
Boechera stricta
Bostr.6864s0182
N
Bo7g064520
Brassica oleracea
Bo7g064520
N
Bra012102
Brassica rapa
Bra012102
N
Carubv10016973m.g
Capsella rubella
Carubv10016973m.g
N
Carubv10017026m.g
Capsella rubella
Carubv10017026m.g
N
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
Thhalv10003860m.g
Eutrema salsugineum
Thhalv10003860m.g
N