CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MAC_07653
(
Metarhizium acridum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MAC_07653
T254615_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.750
0.750
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.750
0.750
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.708
0.708
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFY86272
MADS box
10
57
AIKDDRNRSVTFLKRKGGLFKKAHELSVLCSVDVAVFIFGNNKKLYEY
Links
Other
MADS box
family TFs
Other
Metarhizium acridum
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00307
Aquilegia coerulea
Aquca_009_00307
N
scaffold_403309.1
Arabidopsis lyrata
scaffold_403309.1
N
AT2G44020
Arabidopsis thaliana
AT2G44020
N
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
Bo4g021230
Brassica oleracea
Bo4g021230
N
PK11431.1
Cannabis sativa
PK11431.1
N
Cagra.1517s0032
Capsella grandiflora
Cagra.1517s0032
N
Carubv10023033m.g
Capsella rubella
Carubv10023033m.g
N
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
Ca_10412
Cicer arietinum
Ca_10412
N
Cla017427
Citrullus lanatus
Cla017427
N
Ciclev10000930m.g
Citrus clementina
Ciclev10000930m.g
N
orange1.1g048759m.g
Citrus sinensis
orange1.1g048759m.g
N
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
Thhalv10001406m.g
Eutrema salsugineum
Thhalv10001406m.g
N
Gorai.003G090600
Gossypium raimondii
Gorai.003G090600
N
cassava22183.valid.m1
Manihot esculenta
cassava22183.valid.m1
N
POPTR_0013s12100
Populus trichocarpa
POPTR_0013s12100
N
SapurV1A.0179s0360
Salix purpurea
SapurV1A.0179s0360
N
SapurV1A.0287s0020
Salix purpurea
SapurV1A.0287s0020
N
SapurV1A.0596s0020
Salix purpurea
SapurV1A.0596s0020
N
TCM_001393
Theobroma cacao
TCM_001393
N