CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_4g032620
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_4g032620
T254774_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES87722
MADS box
10
54
FIVNDASRKATYNNRWRGLLKKVYELSTLCGVEACAIVYGPYEPQ
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000009223
Ailuropoda melanoleuca
ENSAMEG00000009223
I
0.000
Alligator_sinensis_CCG010991.1
Alligator sinensis
Alligator_sinensis_CCG010991.1
I
0.000
ENSAPLG00000007026
Anas platyrhynchos
ENSAPLG00000007026
I
0.000
ENSAPLG00000011653
Anas platyrhynchos
ENSAPLG00000011653
I
0.000
AMAM011616
Anopheles maculatus
AMAM011616
I
0.000
AQUA009446
Anopheles quadriannulatus
AQUA009446
I
0.000
Afo_R008955
Aptenodytes forsteri
Afo_R008955
I
0.000
ENSBTAP00000006227-D1
Bos grunniens
ENSBTAP00000006227-D1
I
0.000
Brh_R000794
Buceros rhinoceros
Brh_R000794
I
0.000
RUNX1
Callithrix jacchus
ENSCJAG00000002816
I
0.000
Aan_R005895
Calypte anna
Aan_R005895
I
0.000
ENSCAFG00000031052
Canis familiaris
ENSCAFG00000031052
I
0.000
csin105545
Clonorchis sinensis
csin105545
I
0.000
CABZ01102124.1
Danio rerio
ENSDARG00000103592
I
0.000
runx2b
Danio rerio
ENSDARG00000059233
I
0.000
DILT_0000572101
Diphyllobothrium latum
DILT_0000572101
I
0.000
RUNX2
Felis catus
ENSFCAG00000022480
I
0.000
ENSFCAG00000029032
Felis catus
ENSFCAG00000029032
I
0.000
Gfo_R013848
Geospiza fortis
Gfo_R013848
I
0.000
HMEL009842
Heliconius melpomene
HMEL009842
I
0.000
TTAC_0000783001
Hydatigera taeniaeformis
TTAC_0000783001
I
0.000
HDID_0000068701
Hymenolepis diminuta
HDID_0000068701
I
0.000
HmN_000789900
Hymenolepis microstoma
HmN_000789900
I
0.000
HmN_000790000
Hymenolepis microstoma
HmN_000790000
I
0.000
HNAJ_0000973501
Hymenolepis nana
HNAJ_0000973501
I
0.000
HNAJ_0001011401
Hymenolepis nana
HNAJ_0001011401
I
0.000
ENSSTOG00000020082
Ictidomys tridecemlineatus
ENSSTOG00000020082
I
0.000
RUNX2
Loxodonta africana
ENSLAFG00000005054
I
0.000
RUNX1
Macaca mulatta
ENSMMUG00000001649
I
0.000
RUNX2
Meleagris gallopavo
ENSMGAG00000014267
I
0.000
ENSMGAG00000002035
Meleagris gallopavo
ENSMGAG00000002035
I
0.000
ENSMGAG00000014534
Meleagris gallopavo
ENSMGAG00000014534
I
0.000
MCOS_0000437401
Mesocestoides corti
MCOS_0000437401
I
0.000
RUNX2
Myotis lucifugus
ENSMLUG00000000514
I
0.000
T265_03056
Opisthorchis viverrini
T265_03056
I
0.000
ENSOANG00000031074
Ornithorhynchus anatinus
ENSOANG00000031074
I
0.000
RUNX2
Ornithorhynchus anatinus
ENSOANG00000008265
I
0.000
ENSOCUG00000011739
Oryctolagus cuniculus
ENSOCUG00000011739
I
0.000
PXEA_0003260001
Protopolystoma xenopodis
PXEA_0003260001
N
0.000
ENSSHAG00000012559
Sarcophilus harrisii
ENSSHAG00000012559
I
0.000
SSLN_0000508301
Schistocephalus solidus
SSLN_0000508301
I
0.000
A_07565
Schistosoma haematobium
A_07565
I
0.000
A_06411
Schistosoma haematobium
A_06411
I
0.000
Sjc_0130210
Schistosoma japonicum
Sjc_0130210
I
0.000
Smp_174320
Schistosoma mansoni
Smp_174320
D
0.000
SMTD_0000935101
Schistosoma mattheei
SMTD_0000935101
I
0.000
SROB_0000638901
Schistosoma rodhaini
SROB_0000638901
I
0.000
SPER_0000558501
Spirometra erinaceieuropaei
SPER_0000558501
I
0.000
ENSSSCG00000025551
Sus scrofa
ENSSSCG00000025551
I
0.000
TsM_000741200
Taenia solium
TsM_000741200
I
0.000
TRE_0000705801
Trichobilharzia regenti
TRE_0000705801
I
0.000
RUNX2
Tupaia belangeri
ENSTBEG00000000948
I
0.000
Tal_R011874
Tyto alba
Tal_R011874
I
0.000