Cagra.0114s0045 (Capsella grandiflora)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cagra.0114s0045 T257651_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0114s0045.1.p MADS box 10 54

Links

Other MADS box family TFs
Other Capsella grandiflora TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N
LBD11 Arabidopsis thaliana AT2G28500 N
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N
Bo01039s010 Brassica oleracea Bo01039s010 N
Bo3g040220 Brassica oleracea Bo3g040220 N
Bo4g165420 Brassica oleracea Bo4g165420 N
Bra011942 Brassica rapa Bra011942 N
Bra035698 Brassica rapa Bra035698 N
PK27389.1 Cannabis sativa PK27389.1 I
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N
Carubv10023989m.g Capsella rubella Carubv10023989m.g N
Carubv10010390m.g Capsella rubella Carubv10010390m.g N
Ca_04287 Cicer arietinum Ca_04287 I
Ca_14605 Cicer arietinum Ca_14605 I
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I
Cucsa.166030 Cucumis sativus Cucsa.166030 N
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N
GLYMA13G40370 Glycine max GLYMA13G40370 I
GLYMA10G35760 Glycine max GLYMA10G35760 I
GLYMA11G15810 Glycine max GLYMA11G15810 N
GLYMA15G05030 Glycine max GLYMA15G05030 I
GLYMA12G07650 Glycine max GLYMA12G07650 I
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I
cassava40961.m1 Manihot esculenta cassava40961.m1 I
cassava44959.m1 Manihot esculenta cassava44959.m1 N
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I
cassava16668.m1 Manihot esculenta cassava16668.m1 N
cassava11218.m1 Manihot esculenta cassava11218.m1 I
MTR_4g060950 Medicago truncatula MTR_4g060950 I
MTR_1g095850 Medicago truncatula MTR_1g095850 I
Pm018585 Prunus mume Pm018585 I
Pm000938 Prunus mume Pm000938 I
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I