Thhalv10008781m.g (Eutrema salsugineum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Thhalv10008781m.g T247337_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10008781m LOB 35 133

Links

Other LOB family TFs
Other Eutrema salsugineum TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.970
Bo01039s010 Brassica oleracea Bo01039s010 N 0.960
Bo5g008590 Brassica oleracea Bo5g008590 N 0.960
Bra018675 Brassica rapa Bra018675 N 0.960
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.960
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.960
LBD11 Arabidopsis thaliana AT2G28500 N 0.949
Bo4g165420 Brassica oleracea Bo4g165420 N 0.949
Bra011942 Brassica rapa Bra011942 N 0.949
Bra035698 Brassica rapa Bra035698 N 0.949
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.949
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.949
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.949
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.949
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.939
Bo3g040220 Brassica oleracea Bo3g040220 N 0.929
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.929
Bo8g112780 Brassica oleracea Bo8g112780 N 0.919
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.919
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.919
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.919
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.919
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.919
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.919
Bra000491 Brassica rapa Bra000491 N 0.909
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.909
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.909
PK27389.1 Cannabis sativa PK27389.1 I 0.909
Bra031599 Brassica rapa Bra031599 N 0.899
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.899
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.899
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.899
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.899
TCM_041094 Theobroma cacao TCM_041094 I 0.899
Pm000938 Prunus mume Pm000938 I 0.899
30111.m000703 Ricinus communis 30111.m000703 I 0.899
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.899
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.899
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.899
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.899
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.899
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.889
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.889
Ca_14605 Cicer arietinum Ca_14605 I 0.889
Cla020379 Citrullus lanatus Cla020379 I 0.889
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.889
MDP0000319331 Malus domestica MDP0000319331 I 0.889
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.889
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.879
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.879
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.879
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.879
TCM_043081 Theobroma cacao TCM_043081 I 0.879
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.879
Ca_04287 Cicer arietinum Ca_04287 I 0.879
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.879
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.879
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.879
MDP0000218986 Malus domestica MDP0000218986 I 0.879
MDP0000318244 Malus domestica MDP0000318244 I 0.879
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.879
PK23777.1 Cannabis sativa PK23777.1 I 0.879
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.869
Cla000556 Citrullus lanatus Cla000556 I 0.869
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.869
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.869
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.869
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.859
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.859
Pm018585 Prunus mume Pm018585 I 0.859
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.859
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.859
Gorai.012G185900 Gossypium raimondii Gorai.012G185900 N 0.849
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.848
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.848
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.848
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.848
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.848
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.848
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.848
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.848
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.848
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.848
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.848
MDP0000123013 Malus domestica MDP0000123013 I 0.848
MDP0000151784 Malus domestica MDP0000151784 I 0.848
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.846
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.838
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.838
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.838
MDP0000879799 Malus domestica MDP0000879799 N 0.838
LjSGA_079940.1 Lotus japonicus LjSGA_079940.1 N 0.833
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.830
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.828
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.828
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.828
mgf022524m Mimulus guttatus mgf022524m N 0.828
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.828
MDP0000822986 Malus domestica MDP0000822986 I 0.828
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.818
Ca_02507 Cicer arietinum Ca_02507 N 0.818
mgf019622m Mimulus guttatus mgf019622m N 0.818
OB05G11740 Oryza brachyantha OB05G11740 I 0.808
OBART05G01640 Oryza barthii OBART05G01640 N 0.808
Cla005134 Citrullus lanatus Cla005134 N 0.808
mgf015666m Mimulus guttatus mgf015666m N 0.808
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.808
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.804
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.804
evm.TU.contig_40341.2 Carica papaya evm.TU.contig_40341.2 N 0.804
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.798
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.798
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.798
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.798
PGSC0003DMG400027372 Solanum tuberosum PGSC0003DMG400027372 I 0.795
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.788
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.788
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.788
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.788
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.788
Si024430m.g Setaria italica Si024430m.g N 0.788
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.788
Cla005133 Citrullus lanatus Cla005133 N 0.788
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.788
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.788
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.788
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.788
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.788
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.788
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.788
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N 0.784
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.778
Si037280m.g Setaria italica Si037280m.g N 0.778
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.778
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.778
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.778
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.778
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.778
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.768
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.768
OBART03G13260 Oryza barthii OBART03G13260 N 0.768
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.768
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.768
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.768
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.768
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.768
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.768
OS03G0287400 Oryza sativa OS03G0287400 N 0.768
PK17019.1 Cannabis sativa PK17019.1 I 0.765
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.758
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.758
OB03G23270 Oryza brachyantha OB03G23270 N 0.758
F775_02335 Aegilops tauschii F775_02335 N 0.747
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.747
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.747
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.747
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.737
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.737
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.737
PK09808.1 Cannabis sativa PK09808.1 I 0.732
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.727
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.727
Cucsa.358620 Cucumis sativus Cucsa.358620 N 0.727
BGIOSGA018905 Oryza indica BGIOSGA018905 I 0.719
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I 0.719
OS05G0123000 Oryza sativa OS05G0123000 I 0.719
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.717
cassava41200.m1 Manihot esculenta cassava41200.m1 N 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.712
Cucsa.011680 Cucumis sativus Cucsa.011680 N 0.711
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.707
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.707
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.707
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.707
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.707
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.707
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.707
Ca_13575 Cicer arietinum Ca_13575 I 0.707
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.707
mgf018189m Mimulus guttatus mgf018189m I 0.707
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.707
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.707