Bostr.25219s0157 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.25219s0157 T246683_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25219s0157.1.p LOB 32 130

Links

Other LOB family TFs
Other Boechera stricta TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.970
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.970
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.970
Bo01039s010 Brassica oleracea Bo01039s010 N 0.960
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.960
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.960
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.960
LBD11 Arabidopsis thaliana AT2G28500 N 0.949
Bo4g165420 Brassica oleracea Bo4g165420 N 0.949
Bra011942 Brassica rapa Bra011942 N 0.949
Bra035698 Brassica rapa Bra035698 N 0.949
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.949
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.949
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.949
Bo3g040220 Brassica oleracea Bo3g040220 N 0.929
Bo5g008590 Brassica oleracea Bo5g008590 N 0.919
Bo8g112780 Brassica oleracea Bo8g112780 N 0.919
Bra018675 Brassica rapa Bra018675 N 0.919
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.919
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.919
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.919
Bra000491 Brassica rapa Bra000491 N 0.909
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.909
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.909
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.909
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.909
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.909
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.909
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.909
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.909
Bra031599 Brassica rapa Bra031599 N 0.899
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.899
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.899
TCM_041094 Theobroma cacao TCM_041094 I 0.899
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.899
Pm000938 Prunus mume Pm000938 I 0.899
30111.m000703 Ricinus communis 30111.m000703 I 0.899
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.899
PK27389.1 Cannabis sativa PK27389.1 I 0.899
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.889
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.889
Ca_04287 Cicer arietinum Ca_04287 I 0.889
Ca_14605 Cicer arietinum Ca_14605 I 0.889
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.889
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.889
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.889
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.889
MDP0000319331 Malus domestica MDP0000319331 I 0.889
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.889
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.879
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.879
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.879
Cla020379 Citrullus lanatus Cla020379 I 0.879
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.879
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.879
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.879
MDP0000218986 Malus domestica MDP0000218986 I 0.879
MDP0000318244 Malus domestica MDP0000318244 I 0.879
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.879
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.869
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.869
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.869
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.869
TCM_043081 Theobroma cacao TCM_043081 I 0.869
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.869
Cla000556 Citrullus lanatus Cla000556 I 0.869
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.869
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.869
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.869
PK23777.1 Cannabis sativa PK23777.1 I 0.869
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.859
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.859
Pm018585 Prunus mume Pm018585 I 0.859
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.859
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.859
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.859
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.859
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.848
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.848
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.848
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.848
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.848
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.848
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.838
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.838
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.838
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.838
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.838
MDP0000123013 Malus domestica MDP0000123013 I 0.838
MDP0000151784 Malus domestica MDP0000151784 I 0.838
MDP0000879799 Malus domestica MDP0000879799 N 0.838
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.828
Ca_02507 Cicer arietinum Ca_02507 N 0.828
Cla005134 Citrullus lanatus Cla005134 N 0.828
MDP0000822986 Malus domestica MDP0000822986 I 0.828
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.818
mgf015666m Mimulus guttatus mgf015666m N 0.818
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.808
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.808
mgf019622m Mimulus guttatus mgf019622m N 0.808
mgf022524m Mimulus guttatus mgf022524m N 0.808
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.798
OB05G11740 Oryza brachyantha OB05G11740 I 0.798
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.798
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.798
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.798
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.798
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.788
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.788
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.788
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.788
Si037280m.g Setaria italica Si037280m.g N 0.788
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.788
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.788
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.788
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.788
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.778
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.778
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.778
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.778
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.778
OBART03G13260 Oryza barthii OBART03G13260 N 0.778
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.778
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.778
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.778
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.778
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.778
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.778
OS03G0287400 Oryza sativa OS03G0287400 N 0.778
Si024430m.g Setaria italica Si024430m.g N 0.778
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.778
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.778
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.778
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.778
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.778
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.768
OB03G23270 Oryza brachyantha OB03G23270 N 0.768
Cla005133 Citrullus lanatus Cla005133 N 0.768
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.768
F775_02335 Aegilops tauschii F775_02335 N 0.758
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.758
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.747
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.747
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.747
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.737
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.727
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.727
mgf018189m Mimulus guttatus mgf018189m I 0.727
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.717
GSMUA_Achr9G04330_001 Musa acuminata GSMUA_Achr9G04330_001 N 0.717
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.717
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.717
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.717
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.717
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.717
Cucsa.275710 Cucumis sativus Cucsa.275710 N 0.717
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.717
Lus10031191.g Linum usitatissimum Lus10031191.g I 0.717
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.712
F775_08326 Aegilops tauschii F775_08326 I 0.707
MTR_2g068760 Medicago truncatula MTR_2g068760 I 0.707
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.707
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.707
Ca_13575 Cicer arietinum Ca_13575 I 0.707
Pm018982 Prunus mume Pm018982 I 0.707
Cucsa.239660 Cucumis sativus Cucsa.239660 I 0.707
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.707
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I 0.707
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.707
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I 0.707
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.707
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.707