Gorai.012G185900 (Gossypium raimondii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Gorai.012G185900 T247003_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G185900.1 LOB 43 95

Links

Other LOB family TFs
Other Gossypium raimondii TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm000938 Prunus mume Pm000938 I 0.887
LBD11 Arabidopsis thaliana AT2G28500 N 0.868
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.868
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.868
Cla000556 Citrullus lanatus Cla000556 I 0.868
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.868
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.868
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.868
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.868
Bo3g040220 Brassica oleracea Bo3g040220 N 0.849
Bo5g008590 Brassica oleracea Bo5g008590 N 0.849
Bra018675 Brassica rapa Bra018675 N 0.849
Bra035698 Brassica rapa Bra035698 N 0.849
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.849
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.849
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.849
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.849
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.849
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.849
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.849
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.849
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.849
Bra031599 Brassica rapa Bra031599 N 0.830
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.830
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.830
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.830
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.830
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.830
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.830
Pm018585 Prunus mume Pm018585 I 0.830
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.830
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.830
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.830
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.830
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.830
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.830
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.811
TCM_043081 Theobroma cacao TCM_043081 I 0.811
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.811
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.811
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.811
MDP0000879799 Malus domestica MDP0000879799 N 0.811
orange1.1g047530m.g Citrus sinensis orange1.1g047530m.g I 0.811
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.809
OBART05G01640 Oryza barthii OBART05G01640 N 0.808
OPUNC05G01610 Oryza punctata OPUNC05G01610 N 0.804
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.792
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.792
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.792
F775_02335 Aegilops tauschii F775_02335 N 0.792
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.792
OB03G23270 Oryza brachyantha OB03G23270 N 0.792
OBART03G13260 Oryza barthii OBART03G13260 N 0.792
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.792
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.792
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.792
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.792
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.792
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.792
OS03G0287400 Oryza sativa OS03G0287400 N 0.792
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.792
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.792
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.792
Si024430m.g Setaria italica Si024430m.g N 0.792
Ca_04287 Cicer arietinum Ca_04287 I 0.792
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.792
mgf022524m Mimulus guttatus mgf022524m N 0.792
MDP0000123013 Malus domestica MDP0000123013 I 0.792
MDP0000151784 Malus domestica MDP0000151784 I 0.792
MDP0000822986 Malus domestica MDP0000822986 I 0.792
OB05G11740 Oryza brachyantha OB05G11740 I 0.774
OMERI05G01740 Oryza meridionalis OMERI05G01740 N 0.774
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.774
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.774
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.774
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.774
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.774
Ca_02507 Cicer arietinum Ca_02507 N 0.774
mgf015666m Mimulus guttatus mgf015666m N 0.774
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.774
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.774
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.755
Cla005133 Citrullus lanatus Cla005133 N 0.755
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.736
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.736
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.736
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.736
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.717
Cla004801 Citrullus lanatus Cla004801 N 0.714