Solyc06g075330.1 (Solanum lycopersicum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Solyc06g075330.1 T246097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g075330.1.1 LOB 90 177

Links

Other LOB family TFs
Other Solanum lycopersicum TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.943
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.886
Cla000556 Citrullus lanatus Cla000556 I 0.875
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.875
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.864
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.864
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.864
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.864
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.864
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.864
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.864
PK27389.1 Cannabis sativa PK27389.1 I 0.864
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.852
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.852
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.852
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.852
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.852
Ca_14605 Cicer arietinum Ca_14605 I 0.852
Pm000938 Prunus mume Pm000938 I 0.852
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.852
MDP0000218986 Malus domestica MDP0000218986 I 0.852
MDP0000318244 Malus domestica MDP0000318244 I 0.852
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.852
PK23777.1 Cannabis sativa PK23777.1 I 0.852
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.841
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.841
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.841
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.841
TCM_043081 Theobroma cacao TCM_043081 I 0.841
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.841
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.841
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.841
Ca_04287 Cicer arietinum Ca_04287 I 0.841
Pm018585 Prunus mume Pm018585 I 0.841
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.841
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.841
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.841
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.841
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.841
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.841
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.841
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.830
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.830
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.830
mgf015666m Mimulus guttatus mgf015666m N 0.830
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.830
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.830
MDP0000879799 Malus domestica MDP0000879799 N 0.830
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.830
OB05G11740 Oryza brachyantha OB05G11740 I 0.818
Cla005134 Citrullus lanatus Cla005134 N 0.818
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.818
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.818
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.818
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.818
LBD11 Arabidopsis thaliana AT2G28500 N 0.807
Bo01039s010 Brassica oleracea Bo01039s010 N 0.807
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.807
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.807
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.807
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.807
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.807
MDP0000123013 Malus domestica MDP0000123013 I 0.807
MDP0000151784 Malus domestica MDP0000151784 I 0.807
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.807
Bo4g165420 Brassica oleracea Bo4g165420 N 0.795
Bra000491 Brassica rapa Bra000491 N 0.795
Bra035698 Brassica rapa Bra035698 N 0.795
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.795
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.795
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.795
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.795
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.795
MDP0000822986 Malus domestica MDP0000822986 I 0.795
Bo3g040220 Brassica oleracea Bo3g040220 N 0.784
Bra011942 Brassica rapa Bra011942 N 0.784
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.784
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.784
Ca_02507 Cicer arietinum Ca_02507 N 0.784
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.784
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.784
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.784
TCM_041094 Theobroma cacao TCM_041094 I 0.778
30111.m000703 Ricinus communis 30111.m000703 I 0.778
MDP0000319331 Malus domestica MDP0000319331 I 0.778
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.773
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.773
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.773
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.773
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.773
mgf022524m Mimulus guttatus mgf022524m N 0.773
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.773
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.768
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.761
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.761
Bo5g008590 Brassica oleracea Bo5g008590 N 0.761
Bra018675 Brassica rapa Bra018675 N 0.761
OBART03G13260 Oryza barthii OBART03G13260 N 0.761
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.761
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.761
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.761
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.761
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.761
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.761
OS03G0287400 Oryza sativa OS03G0287400 N 0.761
Si024430m.g Setaria italica Si024430m.g N 0.761
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.761
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.758
Cla020379 Citrullus lanatus Cla020379 I 0.758
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.758
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.750
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.750
OB03G23270 Oryza brachyantha OB03G23270 N 0.750
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I 0.750
Si037280m.g Setaria italica Si037280m.g N 0.750
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.750
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.747
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.747
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.747
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.747
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.747
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.747
Bra031599 Brassica rapa Bra031599 N 0.739
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.739
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.739
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.739
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.739
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.739
F775_02335 Aegilops tauschii F775_02335 N 0.727
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.717
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.716
Cla005133 Citrullus lanatus Cla005133 N 0.716
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.705
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.705
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.705
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.705
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.705