cassava41200.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava41200.m1 T246478_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41200.m1 LOB 19 64

Links

Other LOB family TFs
Other Manihot esculenta TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo01039s010 Brassica oleracea Bo01039s010 N 0.739
Bo4g165420 Brassica oleracea Bo4g165420 N 0.739
Bra011942 Brassica rapa Bra011942 N 0.739
Bra035698 Brassica rapa Bra035698 N 0.739
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.739
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.739
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.739
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.739
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.739
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.739
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.739
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.739
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.739
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.739
LBD11 Arabidopsis thaliana AT2G28500 N 0.717
Bo3g040220 Brassica oleracea Bo3g040220 N 0.717
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.717
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.717
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.717
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.717
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.717
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.717
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.717
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.717
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.717
Ca_04287 Cicer arietinum Ca_04287 I 0.717
Ca_14605 Cicer arietinum Ca_14605 I 0.717
Pm000938 Prunus mume Pm000938 I 0.717
Pm018585 Prunus mume Pm018585 I 0.717
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.717
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.717
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.717
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.717
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.717
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.717
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.717
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.717
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.717
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.717
PK27389.1 Cannabis sativa PK27389.1 I 0.717
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.702