CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10006587m.g
(
Citrus clementina
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ciclev10006587m.g
T257864_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10006587m
MADS box
1
30
IYKKATELVTLTGSEIAVVVFSQSGKPYTF
Links
Other
MADS box
family TFs
Other
Citrus clementina
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10006405m.g
Citrus clementina
Ciclev10006405m.g
N
0.700
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.767
Ciclev10007015m.g
Citrus clementina
Ciclev10007015m.g
N
0.967
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
0.733
Ciclev10006957m.g
Citrus clementina
Ciclev10006957m.g
N
0.833
Ciclev10006743m.g
Citrus clementina
Ciclev10006743m.g
N
0.700
Ciclev10006708m.g
Citrus clementina
Ciclev10006708m.g
N
0.733
Ciclev10006615m.g
Citrus clementina
Ciclev10006615m.g
N
0.767
Ciclev10006530m.g
Citrus clementina
Ciclev10006530m.g
N
0.833
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
0.733
Ciclev10006439m.g
Citrus clementina
Ciclev10006439m.g
N
0.800
orange1.1g039494m.g
Citrus sinensis
orange1.1g039494m.g
N
0.700
orange1.1g040485m.g
Citrus sinensis
orange1.1g040485m.g
N
0.800
orange1.1g044532m.g
Citrus sinensis
orange1.1g044532m.g
N
0.833
orange1.1g047467m.g
Citrus sinensis
orange1.1g047467m.g
N
0.967
Eucgr.E02872
Eucalyptus grandis
Eucgr.E02872
N
0.733
Eucgr.L01236
Eucalyptus grandis
Eucgr.L01236
N
0.733
Lus10028473.g
Linum usitatissimum
Lus10028473.g
N
0.700
Lus10028490.g
Linum usitatissimum
Lus10028490.g
N
0.700
cassava9826.m1
Manihot esculenta
cassava9826.m1
N
0.700