CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000185853
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000185853
T258673_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000185853
MADS box
11
55
LIPNETARKMAFRKRKKSVYKKADELSKLCDIDVALVVYEADQRK
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000251651
Malus domestica
MDP0000251651
N
0.933
MDP0000303501
Malus domestica
MDP0000303501
N
0.909
Pm025575
Prunus mume
Pm025575
N
0.733
Pm025576
Prunus mume
Pm025576
N
0.727
Pm025578
Prunus mume
Pm025578
N
0.733
Pm025614
Prunus mume
Pm025614
N
0.750
Pm025630
Prunus mume
Pm025630
N
0.722
PRUPE_ppa013383mg
Prunus persica
PRUPE_ppa013383mg
N
0.800
PRUPE_ppa018410mg
Prunus persica
PRUPE_ppa018410mg
N
0.756
PRUPE_ppa023499mg
Prunus persica
PRUPE_ppa023499mg
N
0.733
PRUPE_ppa026256mg
Prunus persica
PRUPE_ppa026256mg
N
0.733