TELCIR_03792 (Teladorsagia circumcincta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 TELCIR_03792 T259664_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.893 0.893
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.893 0.893
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.893 0.893
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.857 0.857
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.857 0.857
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.857 0.857
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.857 0.857
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.857 0.857
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.857 0.857
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.857 0.857
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.857 0.857
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.857 0.857
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.857 0.857
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.857 0.857
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.857 0.857
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.857 0.857
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.857 0.857
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.857 0.857
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.857 0.857
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.857 0.857
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.857 0.857
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.857 0.857
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.857 0.857
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.857 0.857
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.857 0.857
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.857 0.857
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.714 0.714
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.714 0.714
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.714 0.714
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.714 0.714
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.714 0.714
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_03792 MADS box 105 132

Links

Other MADS box family TFs
Other Teladorsagia circumcincta TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I 0.893
AAEL008720 Aedes aegypti AAEL008720 I 0.893
AAEL010926 Aedes aegypti AAEL010926 I 0.893
ANCDUO_04431 Ancylostoma duodenale ANCDUO_04431 I 0.929
AALB009948 Anopheles albimanus AALB009948 I 0.929
AARA006325 Anopheles arabiensis AARA006325 I 0.893
AATE011966 Anopheles atroparvus AATE011966 I 0.862
ACHR000964 Anopheles christyi ACHR000964 I 0.926
ACOM041693 Anopheles coluzzii ACOM041693 I 0.893
ACUA004576 Anopheles culicifacies ACUA004576 I 0.929
ADAC008363 Anopheles darlingi ADAC008363 I 0.926
ADIR000346 Anopheles dirus ADIR000346 I 0.926
AEPI007010 Anopheles epiroticus AEPI007010 I 0.893
AFAF013563 Anopheles farauti AFAF013563 I 0.893
AFUN006147 Anopheles funestus AFUN006147 I 0.926
AGAP010512 Anopheles gambiae AGAP010512 I 0.893
AMIN001258 Anopheles minimus AMIN001258 I 0.893
AQUA001308 Anopheles quadriannulatus AQUA001308 I 0.893
ASIS007770 Anopheles sinensis ASIS007770 I 0.926
ASIS013674 Anopheles sinensis ASIS013674 N 0.893
ASTEI07120 Anopheles stephensi ASTEI07120 I 0.926
GB47234 Apis mellifera GB47234 I 0.893
Afo_R000461 Aptenodytes forsteri Afo_R000461 I 0.857
ACEP12187 Atta cephalotes ACEP12187 I 0.893
BGLB003854 Biomphalaria glabrata BGLB003854 I 0.893
BGHDH14_bgh04421 Blumeria graminis BGHDH14_bgh04421 I 0.750
BGIBMGA001384 Bombyx mori BGIBMGA001384 I 0.897
Bcin09g06140 Botrytis cinerea Bcin09g06140 I 0.750
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.893
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.893
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I 0.724
Brh_R011000 Buceros rhinoceros Brh_R011000 I 0.923
BXY_0217000 Bursaphelenchus xylophilus BXY_0217000 I 0.821
CJA08385 Caenorhabditis japonica CJA08385 I 0.893
Aan_R005414 Calypte anna Aan_R005414 I 0.857
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.893
CANTEDRAFT_132918 Candida tenuis CANTEDRAFT_132918 I 0.750
CapteG221100 Capitella teleta CapteG221100 I 0.893
SRF Cavia porcellus ENSCPOG00000022327 I 0.857
Cmyd_10009988 Chelonia mydas Cmyd_10009988 I 0.857
CLEC013390 Cimex lectularius CLEC013390 I 0.893
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I 0.821
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I 0.724
CFIO01_12657 Colletotrichum fioriniae CFIO01_12657 I 0.750
GLRG_02553 Colletotrichum graminicola GLRG_02553 I 0.750
CH063_12904 Colletotrichum higginsianum CH063_12904 I 0.750
Cob_05053 Colletotrichum orbiculare Cob_05053 I 0.750
CSUB01_05290 Colletotrichum sublineola CSUB01_05290 I 0.750
CGI_10019446 Crassostrea gigas CGI_10019446 I 0.893
CpipJ_CPIJ008335 Culex pipiens CpipJ_CPIJ008335 I 0.758
CPIJ008335 Culex quinquefasciatus CPIJ008335 I 0.758
DACRYDRAFT_57073 Dacryopinax sp DACRYDRAFT_57073 I 0.786
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.893
srfB Dictyostelium discoideum DDB_G0282835 I 0.821
GF11392 Drosophila ananassae FBgn0088432 I 0.893
GG22961 Drosophila erecta FBgn0115118 I 0.893
GH20989 Drosophila grimshawi FBgn0128451 I 0.893
bs Drosophila melanogaster FBgn0004101 D 0.893
GI21322 Drosophila mojavensis FBgn0144052 I 0.893
GL20046 Drosophila persimilis FBgn0157643 I 0.893
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.893
GM11854 Drosophila sechellia FBgn0166795 I 0.893
GD11852 Drosophila simulans FBgn0183591 I 0.893
GJ21595 Drosophila virilis FBgn0208714 I 0.893
GK22205 Drosophila willistoni FBgn0224190 I 0.893
GE14398 Drosophila yakuba FBgn0232006 I 0.893
SRF Erinaceus europaeus ENSEEUG00000005614 I 0.846
ENSFALG00000000878 Ficedula albicollis ENSFALG00000000878 I 0.857
ENSGMOG00000001540 Gadus morhua ENSGMOG00000001540 I 0.923
GGTG_11623 Gaeumannomyces graminis GGTG_11623 I 0.750
Gfo_R009695 Geospiza fortis Gfo_R009695 I 0.857
GLOTRDRAFT_42980 Gloeophyllum trabeum GLOTRDRAFT_42980 I 0.786
SRF Gorilla gorilla ENSGGOG00000006293 I 0.923
HPLM_0000743501 Haemonchus placei HPLM_0000743501 I 0.929
HHAL001485-PA Halyomorpha halys HHAL001485-PA I 0.929
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.893
HMEL017830 Heliconius melpomene HMEL017830 I 0.893
HelroG137972 Helobdella robusta HelroG137972 I 0.786
Hba_21368 Heterorhabditis bacteriophora Hba_21368 I 0.929
ISCW019966 Ixodes scapularis ISCW019966 I 0.893
SAKL0B11704g Lachancea kluyveri SAKL0B11704g I 0.750
LotgiG59850 Lottia gigantea LotgiG59850 I 0.893
SRF Loxodonta africana ENSLAFG00000010278 I 0.857
LCUP011663 Lucilia cuprina LCUP011663 I 0.862
LLOJ005985 Lutzomyia longipalpis LLOJ005985 I 0.867
ENSP00000265354 Macaca fascicularis ENSP00000265354 I 0.800
MGG_02773 Magnaporthe oryzae MGG_02773 I 0.750
MAPG_02274 Magnaporthe poae MAPG_02274 I 0.750
MBM_07319 Marssonina brunnea MBM_07319 I 0.750
MESCA001358 Megaselia scalaris MESCA001358 I 0.926
MCINX015635 Melitaea cinxia MCINX015635 I 0.893
MVLG_04297 Microbotryum violaceum MVLG_04297 I 0.750
DI09_81p70 Microsporidia sp DI09_81p70 I 0.786
E5Q_02524 Mixia osmundae E5Q_02524 I 0.786
e_gw1.2.1101.1 Mucor circinelloides e_gw1.2.1101.1 I 0.750
e_gw1.4.1161.1 Mucor circinelloides e_gw1.4.1161.1 I 0.786
e_gw1.6.1281.1 Mucor circinelloides e_gw1.6.1281.1 I 0.786
estExt_fgeneshMC_pm.C_40429 Mucor circinelloides estExt_fgeneshMC_pm.C_40429 I 0.786
gw1.5.917.1 Mucor circinelloides gw1.5.917.1 I 0.786
gw1.8.565.1 Mucor circinelloides gw1.8.565.1 I 0.786
MDOA002443 Musca domestica MDOA002443 I 0.893
Myotis_brandtii_SRF_10026135 Myotis brandtii Myotis_brandtii_SRF_10026135 I 0.774
ENSMLUG00000008828 Myotis lucifugus ENSMLUG00000008828 I 0.857
NV18787 Nasonia vitripennis NV18787 I 0.893
NCER_102270 Nosema ceranae NCER_102270 I 0.750
ENSOPRG00000002509 Ochotona princeps ENSOPRG00000002509 I 0.923
OIDMADRAFT_123333 Oidiodendron maius OIDMADRAFT_123333 I 0.750
SNAPOd2T00012736001 Oikopleura dioica SNAPOd2T00012736001 I 0.786
Ogr17973 Ophisaurus gracilis Ogr17973 I 0.774
ENSOARG00000005757 Ovis aries ENSOARG00000005757 I 0.857
PAXRUDRAFT_829045 Paxillus rubicundulus PAXRUDRAFT_829045 I 0.786
PFICI_14124 Pestalotiopsis fici PFICI_14124 I 0.750
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I 0.724
e_gw1.1.687.1 Phycomyces blakesleeanus e_gw1.1.687.1 I 0.786
fgeneshPB_pg.1__662 Phycomyces blakesleeanus fgeneshPB_pg.1__662 I 0.786
gw1.27.105.1 Phycomyces blakesleeanus gw1.27.105.1 I 0.786
gw1.3.516.1 Phycomyces blakesleeanus gw1.3.516.1 I 0.786
PIIN_00796 Piriformospora indica PIIN_00796 I 0.786
PredSwiss_CON2346.1 Pneumocystis carinii PredSwiss_CON2346.1 I 0.750
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I 0.857
scaffold2825-EXSNAP2012.1 Pristionchus exspectatus scaffold2825-EXSNAP2012.1 I 0.750
scaffold690-EXSNAP2012.12 Pristionchus exspectatus scaffold690-EXSNAP2012.12 I 0.893
Ppa-unc-120 Pristionchus pacificus PPA14131 I 0.893
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.857
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.786
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.786
RO3G_06121 Rhizopus oryzae RO3G_06121 I 0.786
RO3G_07165 Rhizopus oryzae RO3G_07165 I 0.759
RO3G_11614 Rhizopus oryzae RO3G_11614 I 0.786
RO3G_15079 Rhizopus oryzae RO3G_15079 I 0.786
RHTO_04199 Rhodosporidium toruloides RHTO_04199 I 0.714
O9G_005180 Rozella allomycis O9G_005180 I 0.857
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.893
SBOR_8145 Sclerotinia borealis SBOR_8145 I 0.750
SS1G_05588 Sclerotinia sclerotiorum SS1G_05588 I 0.750
M408DRAFT_79374 Serendipita vermifera M408DRAFT_79374 I 0.786
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.893
SINV23954 Solenopsis invicta SINV23954 I 0.926
SRF Sorex araneus ENSSARG00000003401 I 0.846
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.857
sr10299 Sporisorium reilianum sr10299 I 0.714
SNOG_07763 Stagonospora nodorum SNOG_07763 I 0.724
L596_g5274 Steinernema carpocapsae L596_g5274 I 0.714
L889_g24087 Steinernema feltiae L889_g24087 I 0.714
L893_g14743 Steinernema glaseri L893_g14743 I 0.714
L898_g9834 Steinernema monticolum L898_g9834 I 0.714
L892_g14520 Steinernema scapterisci L892_g14520 I 0.714
SMAR003014 Strigamia maritima SMAR003014 I 0.893
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I 0.893
SRF Taeniopygia guttata ENSTGUG00000004738 I 0.857
TELCIR_12851 Teladorsagia circumcincta TELCIR_12851 I 0.963
AMSG_06825 Thecamonas trahens AMSG_06825 I 0.714
TC004911 Tribolium castaneum TC004911 I 0.893
D917_02561 Trichinella nativa D917_02561 I 0.893
EFV60876 Trichinella spiralis EFV60876 I 0.893
TriadG59812 Trichoplax adhaerens TriadG59812 I 0.714
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.893
D918_07967 Trichuris suis D918_07967 I 0.893
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.893
VDAG_01770 Verticillium dahliae VDAG_01770 I 0.750
SRF Vicugna pacos ENSVPAG00000008912 I 0.923
J056_002827 Wallemia ichthyophaga J056_002827 I 0.714
WALSEDRAFT_9958 Wallemia sebi WALSEDRAFT_9958 I 0.714
L798_08800 Zootermopsis nevadensis L798_08800 I 0.893