CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MBD10
(
Arabidopsis thaliana
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
AT1G15340
T259892_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G15340.1
MBD
4
77
TDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRR
AT1G15340.2
MBD
4
118
TDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNKEAAEKNEEAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVN
Links
Other
MBD
family TFs
Other
Arabidopsis thaliana
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00004p00169140
Amborella trichopoda
AMTR_s00004p00169140
N
0.000
Aquca_020_00103
Aquilegia coerulea
Aquca_020_00103
N
0.740
PK04144.1
Cannabis sativa
PK04144.1
N
0.730
Ca_19192
Cicer arietinum
Ca_19192
N
0.797
Ca_06682
Cicer arietinum
Ca_06682
N
0.726
Cla016961
Citrullus lanatus
Cla016961
N
0.000
Cla012920
Citrullus lanatus
Cla012920
N
0.743
orange1.1g022412m.g
Citrus sinensis
orange1.1g022412m.g
N
0.703
Cucsa.132180
Cucumis sativus
Cucsa.132180
N
0.000
gene31058-v1.0-hybrid
Fragaria vesca
gene31058-v1.0-hybrid
N
0.000
GLYMA04G23780
Glycine max
GLYMA04G23780
N
0.740
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.795
GLYMA13G44230
Glycine max
GLYMA13G44230
N
0.767
GLYMA06G30590
Glycine max
GLYMA06G30590
N
0.716
GLYMA06G30350
Glycine max
GLYMA06G30350
N
0.703
GLYMA06G25310
Glycine max
GLYMA06G25310
N
0.716
GLYMA04G23980
Glycine max
GLYMA04G23980
N
0.716
Gorai.011G083900
Gossypium raimondii
Gorai.011G083900
N
0.770
Lus10043263.g
Linum usitatissimum
Lus10043263.g
N
0.000
Lus10030108.g
Linum usitatissimum
Lus10030108.g
N
0.000
Lus10002168.g
Linum usitatissimum
Lus10002168.g
N
0.000
chr4.CM0234.40.nc
Lotus japonicus
chr4.CM0234.40.nc
N
0.716
MDP0000152128
Malus domestica
MDP0000152128
N
0.703
MDP0000375866
Malus domestica
MDP0000375866
N
0.716
MDP0000574053
Malus domestica
MDP0000574053
N
0.703
cassava13513.valid.m1
Manihot esculenta
cassava13513.valid.m1
N
0.000
cassava13512.valid.m1
Manihot esculenta
cassava13512.valid.m1
N
0.000
Pm027560
Prunus mume
Pm027560
N
0.000
PRUPE_ppa008789mg
Prunus persica
PRUPE_ppa008789mg
N
0.000
SapurV1A.0034s0480
Salix purpurea
SapurV1A.0034s0480
N
0.000
SapurV1A.1100s0070
Salix purpurea
SapurV1A.1100s0070
N
0.000
Solyc12g009590.1
Solanum lycopersicum
Solyc12g009590.1
N
0.000
PGSC0003DMG400002913
Solanum tuberosum
PGSC0003DMG400002913
N
0.000
TCM_027169
Theobroma cacao
TCM_027169
N
0.764
VIT_11s0016g05580
Vitis vinifera
VIT_11s0016g05580
N
0.000