Alligator_sinensis_CCG020665.1 (Alligator sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Alligator_sinensis_CCG020665.1 T261225_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SETDB1
M11031_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SETDB1_01 		0.933 0.933
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG020665.1 MBD 88 162

Links

Other MBD family TFs
Other Alligator sinensis TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_302233.1 Arabidopsis lyrata scaffold_302233.1 N
AT3G18870 Arabidopsis thaliana AT3G18870 N
Bostr.19424s0770 Boechera stricta Bostr.19424s0770 N
Bo5g116880 Brassica oleracea Bo5g116880 N
Cagra.1681s0059 Capsella grandiflora Cagra.1681s0059 N
Carubv10015534m.g Capsella rubella Carubv10015534m.g N
Thhalv10022350m.g Eutrema salsugineum Thhalv10022350m.g N