CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10022350m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10022350m.g
T265201_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10022350m
mTERF
40
122
RENLRYLSTLGVIPQNPRLAPPADNLPAILSAVNFLKSKGISDQDFPRLVFLCPQLFSPTFDISRIDPVFDFLTLELGASAAE
Thhalv10022350m
mTERF
104
272
RIDPVFDFLTLELGASAAESRGLIVNCPNILLSDVEYCLRPTLVYLRELGLQNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFQNEEAARVCGRIPAIFGYSIEDNLRPKFEFLVYDMERELEELKKFPQYFGFSLGKRIKPRHWHLKKKNVRVSLSRMLMWGDLKFY
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10015534m.g
Capsella rubella
Carubv10015534m.g
N
0.908
AT3G18870
Arabidopsis thaliana
AT3G18870
N
0.858
Cagra.1681s0059
Capsella grandiflora
Cagra.1681s0059
N
0.855
Bo5g116880
Brassica oleracea
Bo5g116880
N
0.841
scaffold_302233.1
Arabidopsis lyrata
scaffold_302233.1
N
0.824
Bra022367
Brassica rapa
Bra022367
N
0.808
Bostr.19424s0770
Boechera stricta
Bostr.19424s0770
N
0.796