CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra022367
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra022367
T262189_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra022367.1-P
mTERF
49
120
VIPQNPRLAPPVDNLPAILSAVNFLKSKGISDGDFPRLVYLCPQLFSPTFSISETDPVFDFLAGELGASAAE
Bra022367.1-P
mTERF
110
270
LAGELGASAAESRGLIVNCPSLLLSDVEYCLRPTLVYLKELGVKNLNRASKTNAHVLNTRMEKLRAKVRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFGFSLGRRIKPRHWHLKKKGVRVSLSRLLMWGDHKFY
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g116880
Brassica oleracea
Bo5g116880
N
0.952
Carubv10015534m.g
Capsella rubella
Carubv10015534m.g
N
0.862
Bostr.19424s0770
Boechera stricta
Bostr.19424s0770
N
0.848
Thhalv10022350m.g
Eutrema salsugineum
Thhalv10022350m.g
N
0.808
scaffold_302233.1
Arabidopsis lyrata
scaffold_302233.1
N
0.806
AT3G18870
Arabidopsis thaliana
AT3G18870
N
0.789
Cagra.1681s0059
Capsella grandiflora
Cagra.1681s0059
N
0.761